Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.97■□□□□ 0.79
YBX1P67809 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.97■□□□□ 0.79
YBX1P67809 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YBX1P67809 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
YBX1P67809 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
YBX1P67809 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
YBX1P67809 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
YBX1P67809 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
YBX1P67809 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
YBX1P67809 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
YBX1P67809 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
YBX1P67809 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
YBX1P67809 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
YBX1P67809 AC026185.1-201ENST00000445748 174 ntBASIC19.96■□□□□ 0.79
YBX1P67809 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
YBX1P67809 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.96■□□□□ 0.79
YBX1P67809 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.96■□□□□ 0.79
YBX1P67809 AC016405.3-201ENST00000607710 860 ntBASIC19.96■□□□□ 0.79
YBX1P67809 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
YBX1P67809 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.96■□□□□ 0.79
YBX1P67809 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.96■□□□□ 0.79
YBX1P67809 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
YBX1P67809 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
YBX1P67809 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.95■□□□□ 0.79
YBX1P67809 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.95■□□□□ 0.78
YBX1P67809 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
YBX1P67809 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
YBX1P67809 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
YBX1P67809 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.95■□□□□ 0.78
YBX1P67809 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.95■□□□□ 0.78
YBX1P67809 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.95■□□□□ 0.78
YBX1P67809 AC007322.1-201ENST00000426983 750 ntBASIC19.95■□□□□ 0.78
YBX1P67809 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.95■□□□□ 0.78
YBX1P67809 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
YBX1P67809 AC013268.1-206ENST00000638368 961 ntBASIC19.95■□□□□ 0.78
YBX1P67809 AC112229.1-201ENST00000639295 961 ntBASIC19.95■□□□□ 0.78
YBX1P67809 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
YBX1P67809 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.95■□□□□ 0.78
YBX1P67809 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
YBX1P67809 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
YBX1P67809 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
YBX1P67809 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YBX1P67809 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YBX1P67809 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YBX1P67809 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.94■□□□□ 0.78
YBX1P67809 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
YBX1P67809 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
YBX1P67809 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YBX1P67809 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YBX1P67809 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.94■□□□□ 0.78
YBX1P67809 AC231657.2-201ENST00000624556 255 ntBASIC19.94■□□□□ 0.78
YBX1P67809 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.94■□□□□ 0.78
YBX1P67809 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YBX1P67809 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.94■□□□□ 0.78
YBX1P67809 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
YBX1P67809 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YBX1P67809 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YBX1P67809 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YBX1P67809 AC006128.1-201ENST00000624704 1661 ntBASIC19.94■□□□□ 0.78
YBX1P67809 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
YBX1P67809 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YBX1P67809 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YBX1P67809 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
YBX1P67809 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YBX1P67809 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YBX1P67809 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.93■□□□□ 0.78
YBX1P67809 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
YBX1P67809 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
YBX1P67809 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.93■□□□□ 0.78
YBX1P67809 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.93■□□□□ 0.78
YBX1P67809 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.93■□□□□ 0.78
YBX1P67809 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YBX1P67809 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.93■□□□□ 0.78
YBX1P67809 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
YBX1P67809 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YBX1P67809 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.93■□□□□ 0.78
YBX1P67809 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
YBX1P67809 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
YBX1P67809 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.92■□□□□ 0.78
YBX1P67809 MIR663A-201ENST00000385250 93 ntBASIC19.92■□□□□ 0.78
YBX1P67809 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.92■□□□□ 0.78
YBX1P67809 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms