Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR4P61073 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR4P61073 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR4P61073 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR4P61073 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR4P61073 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCR4P61073 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CXCR4P61073 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 AC005332.7-201ENST00000614046 2005 ntBASIC18.62■□□□□ 0.57
CXCR4P61073 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.62■□□□□ 0.57
CXCR4P61073 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CXCR4P61073 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CXCR4P61073 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.62■□□□□ 0.57
CXCR4P61073 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.62■□□□□ 0.57
CXCR4P61073 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.62■□□□□ 0.57
CXCR4P61073 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.62■□□□□ 0.57
CXCR4P61073 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.62■□□□□ 0.57
CXCR4P61073 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.62■□□□□ 0.57
CXCR4P61073 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.62■□□□□ 0.57
CXCR4P61073 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCR4P61073 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 AC004408.2-201ENST00000623613 2777 ntBASIC18.61■□□□□ 0.57
CXCR4P61073 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.61■□□□□ 0.57
CXCR4P61073 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.61■□□□□ 0.57
CXCR4P61073 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.61■□□□□ 0.57
CXCR4P61073 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.61■□□□□ 0.57
CXCR4P61073 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 AC131281.2-201ENST00000520478 145 ntBASIC18.61■□□□□ 0.57
CXCR4P61073 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CXCR4P61073 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCR4P61073 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CXCR4P61073 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCR4P61073 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCR4P61073 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.6■□□□□ 0.57
CXCR4P61073 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
CXCR4P61073 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCR4P61073 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.6■□□□□ 0.57
CXCR4P61073 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCR4P61073 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.6■□□□□ 0.57
CXCR4P61073 SMUG1P1-201ENST00000590640 811 ntBASIC18.6■□□□□ 0.57
CXCR4P61073 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.6■□□□□ 0.57
CXCR4P61073 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.6■□□□□ 0.57
CXCR4P61073 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCR4P61073 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CXCR4P61073 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CXCR4P61073 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CXCR4P61073 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCR4P61073 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CXCR4P61073 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CXCR4P61073 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.59■□□□□ 0.57
CXCR4P61073 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.59■□□□□ 0.57
CXCR4P61073 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.59■□□□□ 0.57
CXCR4P61073 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.59■□□□□ 0.57
CXCR4P61073 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CXCR4P61073 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.59■□□□□ 0.57
CXCR4P61073 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.59■□□□□ 0.57
CXCR4P61073 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXCR4P61073 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CXCR4P61073 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.58■□□□□ 0.57
CXCR4P61073 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CXCR4P61073 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.58■□□□□ 0.57
CXCR4P61073 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.58■□□□□ 0.57
CXCR4P61073 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms