Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
AP3S2P59780 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3S2P59780 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.56■□□□□ 0.4
AP3S2P59780 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.56■□□□□ 0.4
AP3S2P59780 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 BCL2-203ENST00000589955 5011 ntBASIC17.56■□□□□ 0.4
AP3S2P59780 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
AP3S2P59780 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3S2P59780 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3S2P59780 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.56■□□□□ 0.4
AP3S2P59780 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.55■□□□□ 0.4
AP3S2P59780 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
AP3S2P59780 AC092720.2-201ENST00000602388 1665 ntBASIC17.55■□□□□ 0.4
AP3S2P59780 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
AP3S2P59780 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
AP3S2P59780 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 OR2I1P-207ENST00000453522 948 ntBASIC17.55■□□□□ 0.4
AP3S2P59780 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
AP3S2P59780 pRNA.6-201ENST00000610482 90 ntBASIC17.55■□□□□ 0.4
AP3S2P59780 pRNA.5-201ENST00000612139 90 ntBASIC17.55■□□□□ 0.4
AP3S2P59780 pRNA.11-201ENST00000618423 90 ntBASIC17.55■□□□□ 0.4
AP3S2P59780 pRNA.13-201ENST00000619112 90 ntBASIC17.55■□□□□ 0.4
AP3S2P59780 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
AP3S2P59780 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
AP3S2P59780 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.55■□□□□ 0.4
AP3S2P59780 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3S2P59780 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.55■□□□□ 0.4
AP3S2P59780 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.54■□□□□ 0.4
AP3S2P59780 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
AP3S2P59780 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.54■□□□□ 0.4
AP3S2P59780 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
AP3S2P59780 BX664725.1-201ENST00000438252 379 ntBASIC17.54■□□□□ 0.4
AP3S2P59780 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
AP3S2P59780 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
AP3S2P59780 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.54■□□□□ 0.4
AP3S2P59780 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.54■□□□□ 0.4
AP3S2P59780 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3S2P59780 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3S2P59780 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP3S2P59780 AC004408.2-201ENST00000623613 2777 ntBASIC17.53■□□□□ 0.4
AP3S2P59780 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3S2P59780 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3S2P59780 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3S2P59780 AC120498.9-201ENST00000339021 3867 ntBASIC17.53■□□□□ 0.4
AP3S2P59780 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
AP3S2P59780 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3S2P59780 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
AP3S2P59780 YBX1P4-201ENST00000392794 808 ntBASIC17.53■□□□□ 0.4
AP3S2P59780 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
AP3S2P59780 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
AP3S2P59780 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.53■□□□□ 0.4
AP3S2P59780 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3S2P59780 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3S2P59780 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3S2P59780 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3S2P59780 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3S2P59780 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
AP3S2P59780 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3S2P59780 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
AP3S2P59780 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms