Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN20P56880 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN20P56880 LINC01006-201ENST00000333319 2292 ntBASIC18.74■□□□□ 0.59
CLDN20P56880 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN20P56880 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN20P56880 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN20P56880 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN20P56880 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN20P56880 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN20P56880 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN20P56880 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN20P56880 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN20P56880 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN20P56880 AC245052.3-201ENST00000450182 901 ntBASIC18.73■□□□□ 0.59
CLDN20P56880 AC007322.4-201ENST00000509611 723 ntBASIC18.73■□□□□ 0.59
CLDN20P56880 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN20P56880 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.73■□□□□ 0.59
CLDN20P56880 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN20P56880 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN20P56880 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLDN20P56880 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN20P56880 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.73■□□□□ 0.59
CLDN20P56880 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN20P56880 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN20P56880 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN20P56880 AC068338.2-201ENST00000563278 1430 ntBASIC18.73■□□□□ 0.59
CLDN20P56880 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN20P56880 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLDN20P56880 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN20P56880 AF106564.1-201ENST00000607058 2553 ntBASIC18.72■□□□□ 0.59
CLDN20P56880 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CLDN20P56880 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN20P56880 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CLDN20P56880 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN20P56880 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN20P56880 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN20P56880 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.72■□□□□ 0.59
CLDN20P56880 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN20P56880 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN20P56880 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN20P56880 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN20P56880 FEM1AP4-201ENST00000443167 1987 ntBASIC18.72■□□□□ 0.59
CLDN20P56880 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CLDN20P56880 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN20P56880 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLDN20P56880 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN20P56880 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN20P56880 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN20P56880 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLDN20P56880 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.71■□□□□ 0.58
CLDN20P56880 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
CLDN20P56880 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.71■□□□□ 0.58
CLDN20P56880 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN20P56880 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN20P56880 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN20P56880 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN20P56880 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN20P56880 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN20P56880 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.7■□□□□ 0.58
CLDN20P56880 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN20P56880 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLDN20P56880 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN20P56880 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN20P56880 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN20P56880 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN20P56880 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN20P56880 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLDN20P56880 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN20P56880 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLDN20P56880 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLDN20P56880 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN20P56880 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN20P56880 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN20P56880 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN20P56880 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLDN20P56880 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.69■□□□□ 0.58
CLDN20P56880 AC091799.1-201ENST00000422823 811 ntBASIC18.69■□□□□ 0.58
CLDN20P56880 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CLDN20P56880 CYP2T1P-201ENST00000432607 1285 ntBASIC18.69■□□□□ 0.58
CLDN20P56880 NCF1B-203ENST00000435988 1254 ntBASIC18.69■□□□□ 0.58
CLDN20P56880 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN20P56880 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN20P56880 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLDN20P56880 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CLDN20P56880 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN20P56880 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN20P56880 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLDN20P56880 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLDN20P56880 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms