Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH15P55291 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH15P55291 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CDH15P55291 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH15P55291 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CDH15P55291 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.02■□□□□ 0.63
CDH15P55291 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CDH15P55291 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CDH15P55291 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDH15P55291 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH15P55291 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH15P55291 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH15P55291 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDH15P55291 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.01■□□□□ 0.63
CDH15P55291 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDH15P55291 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH15P55291 AL355001.2-201ENST00000620617 1191 ntBASIC19.01■□□□□ 0.63
CDH15P55291 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH15P55291 TCF3P1-201ENST00000423021 1937 ntBASIC19.01■□□□□ 0.63
CDH15P55291 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CDH15P55291 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH15P55291 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH15P55291 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH15P55291 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19■□□□□ 0.63
CDH15P55291 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CDH15P55291 SF1-220ENST00000626028 704 ntTSL 2 BASIC19■□□□□ 0.63
CDH15P55291 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDH15P55291 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CDH15P55291 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19■□□□□ 0.63
CDH15P55291 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
CDH15P55291 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19■□□□□ 0.63
CDH15P55291 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19■□□□□ 0.63
CDH15P55291 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH15P55291 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDH15P55291 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH15P55291 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH15P55291 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH15P55291 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.99■□□□□ 0.63
CDH15P55291 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH15P55291 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CDH15P55291 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH15P55291 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDH15P55291 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDH15P55291 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH15P55291 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CDH15P55291 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CDH15P55291 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH15P55291 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH15P55291 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH15P55291 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH15P55291 FP700111.2-201ENST00000619190 1892 ntBASIC18.99■□□□□ 0.63
CDH15P55291 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH15P55291 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDH15P55291 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH15P55291 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH15P55291 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH15P55291 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH15P55291 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
CDH15P55291 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDH15P55291 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH15P55291 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH15P55291 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH15P55291 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH15P55291 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH15P55291 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CDH15P55291 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH15P55291 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.97■□□□□ 0.63
CDH15P55291 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
CDH15P55291 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH15P55291 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms