Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.13■□□□□ 0.65
CRISP3P54108 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.13■□□□□ 0.65
CRISP3P54108 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.13■□□□□ 0.65
CRISP3P54108 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.13■□□□□ 0.65
CRISP3P54108 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CRISP3P54108 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CRISP3P54108 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.13■□□□□ 0.65
CRISP3P54108 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CRISP3P54108 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.13■□□□□ 0.65
CRISP3P54108 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CRISP3P54108 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CRISP3P54108 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CRISP3P54108 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.12■□□□□ 0.65
CRISP3P54108 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.12■□□□□ 0.65
CRISP3P54108 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.12■□□□□ 0.65
CRISP3P54108 AP001160.3-201ENST00000601484 763 ntBASIC19.12■□□□□ 0.65
CRISP3P54108 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.12■□□□□ 0.65
CRISP3P54108 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CRISP3P54108 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CRISP3P54108 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.11■□□□□ 0.65
CRISP3P54108 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.11■□□□□ 0.65
CRISP3P54108 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CRISP3P54108 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CRISP3P54108 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CRISP3P54108 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CRISP3P54108 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.11■□□□□ 0.65
CRISP3P54108 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.11■□□□□ 0.65
CRISP3P54108 KRT18P20-201ENST00000548986 1279 ntBASIC19.11■□□□□ 0.65
CRISP3P54108 CCDC92B-201ENST00000575506 885 ntBASIC19.11■□□□□ 0.65
CRISP3P54108 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.11■□□□□ 0.65
CRISP3P54108 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CRISP3P54108 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
CRISP3P54108 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CRISP3P54108 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.11■□□□□ 0.65
CRISP3P54108 AFG3L1P-217ENST00000557444 2447 ntBASIC19.11■□□□□ 0.65
CRISP3P54108 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CRISP3P54108 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.11■□□□□ 0.65
CRISP3P54108 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CRISP3P54108 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CRISP3P54108 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CRISP3P54108 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.1■□□□□ 0.65
CRISP3P54108 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.1■□□□□ 0.65
CRISP3P54108 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.1■□□□□ 0.65
CRISP3P54108 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.1■□□□□ 0.65
CRISP3P54108 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.1■□□□□ 0.65
CRISP3P54108 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.1■□□□□ 0.65
CRISP3P54108 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.1■□□□□ 0.65
CRISP3P54108 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.1■□□□□ 0.65
CRISP3P54108 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.1■□□□□ 0.65
CRISP3P54108 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.1■□□□□ 0.65
CRISP3P54108 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.1■□□□□ 0.65
CRISP3P54108 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CRISP3P54108 AC116050.2-201ENST00000612102 1779 ntBASIC19.1■□□□□ 0.65
CRISP3P54108 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CRISP3P54108 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.1■□□□□ 0.65
CRISP3P54108 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CRISP3P54108 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CRISP3P54108 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CRISP3P54108 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CRISP3P54108 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.09■□□□□ 0.65
CRISP3P54108 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CRISP3P54108 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
CRISP3P54108 SLC7A5P2-201ENST00000553010 536 ntBASIC19.09■□□□□ 0.65
CRISP3P54108 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.09■□□□□ 0.65
CRISP3P54108 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.09■□□□□ 0.65
CRISP3P54108 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.09■□□□□ 0.65
CRISP3P54108 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.09■□□□□ 0.65
CRISP3P54108 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CRISP3P54108 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CRISP3P54108 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CRISP3P54108 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CRISP3P54108 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CRISP3P54108 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.08■□□□□ 0.65
CRISP3P54108 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.08■□□□□ 0.65
CRISP3P54108 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.08■□□□□ 0.65
CRISP3P54108 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms