Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SMSP52788 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMSP52788 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.11■□□□□ 0.65
SMSP52788 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMSP52788 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMSP52788 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMSP52788 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMSP52788 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.1■□□□□ 0.65
SMSP52788 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMSP52788 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.1■□□□□ 0.65
SMSP52788 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.1■□□□□ 0.65
SMSP52788 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMSP52788 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMSP52788 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMSP52788 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.1■□□□□ 0.65
SMSP52788 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMSP52788 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMSP52788 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMSP52788 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMSP52788 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMSP52788 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMSP52788 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.09■□□□□ 0.65
SMSP52788 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.09■□□□□ 0.65
SMSP52788 AC069152.1-201ENST00000438030 544 ntBASIC19.09■□□□□ 0.65
SMSP52788 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.09■□□□□ 0.65
SMSP52788 AL138781.1-201ENST00000566567 1274 ntBASIC19.09■□□□□ 0.65
SMSP52788 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.09■□□□□ 0.65
SMSP52788 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.09■□□□□ 0.65
SMSP52788 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SMSP52788 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SMSP52788 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMSP52788 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.09■□□□□ 0.65
SMSP52788 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.09■□□□□ 0.65
SMSP52788 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMSP52788 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.08■□□□□ 0.65
SMSP52788 AC006128.1-201ENST00000624704 1661 ntBASIC19.08■□□□□ 0.65
SMSP52788 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMSP52788 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMSP52788 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMSP52788 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMSP52788 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMSP52788 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMSP52788 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.08■□□□□ 0.65
SMSP52788 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMSP52788 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SMSP52788 GUSBP6-202ENST00000438529 1198 ntBASIC19.08■□□□□ 0.64
SMSP52788 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.08■□□□□ 0.64
SMSP52788 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.08■□□□□ 0.64
SMSP52788 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.08■□□□□ 0.64
SMSP52788 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.08■□□□□ 0.64
SMSP52788 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SMSP52788 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMSP52788 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMSP52788 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMSP52788 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMSP52788 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMSP52788 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMSP52788 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMSP52788 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMSP52788 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SMSP52788 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.07■□□□□ 0.64
SMSP52788 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 AP006587.3-201ENST00000525742 1516 ntBASIC19.07■□□□□ 0.64
SMSP52788 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SMSP52788 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.07■□□□□ 0.64
SMSP52788 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.07■□□□□ 0.64
SMSP52788 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SMSP52788 AC073210.2-201ENST00000430369 194 ntBASIC19.07■□□□□ 0.64
SMSP52788 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.07■□□□□ 0.64
SMSP52788 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.07■□□□□ 0.64
SMSP52788 KRT18P20-201ENST00000548986 1279 ntBASIC19.07■□□□□ 0.64
SMSP52788 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.07■□□□□ 0.64
SMSP52788 AC105036.2-201ENST00000569468 176 ntBASIC19.07■□□□□ 0.64
SMSP52788 AC133552.2-202ENST00000575694 574 ntBASIC19.07■□□□□ 0.64
SMSP52788 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SMSP52788 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
SMSP52788 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.07■□□□□ 0.64
SMSP52788 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.07■□□□□ 0.64
SMSP52788 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 AC092667.1-201ENST00000434301 2586 ntBASIC19.07■□□□□ 0.64
SMSP52788 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.07■□□□□ 0.64
SMSP52788 GABARAPL3-202ENST00000624044 1851 ntBASIC19.07■□□□□ 0.64
SMSP52788 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMSP52788 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms