Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.54■■□□□ 1.04
TUBP50607 AC091874.3-201ENST00000512672 1195 ntBASIC21.54■■□□□ 1.04
TUBP50607 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.54■■□□□ 1.04
TUBP50607 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.54■■□□□ 1.04
TUBP50607 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.54■■□□□ 1.04
TUBP50607 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.54■■□□□ 1.04
TUBP50607 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.54■■□□□ 1.04
TUBP50607 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TUBP50607 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TUBP50607 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.54■■□□□ 1.04
TUBP50607 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TUBP50607 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TUBP50607 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TUBP50607 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TUBP50607 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.53■■□□□ 1.04
TUBP50607 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TUBP50607 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBP50607 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TUBP50607 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.53■■□□□ 1.04
TUBP50607 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TUBP50607 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.53■■□□□ 1.04
TUBP50607 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBP50607 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBP50607 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
TUBP50607 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TUBP50607 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TUBP50607 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.53■■□□□ 1.04
TUBP50607 AC097658.1-201ENST00000475555 843 ntBASIC21.53■■□□□ 1.04
TUBP50607 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBP50607 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBP50607 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TUBP50607 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBP50607 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBP50607 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBP50607 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBP50607 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBP50607 LSM12P1-201ENST00000411836 588 ntBASIC21.52■■□□□ 1.04
TUBP50607 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TUBP50607 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TUBP50607 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.52■■□□□ 1.04
TUBP50607 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.52■■□□□ 1.04
TUBP50607 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.52■■□□□ 1.04
TUBP50607 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.52■■□□□ 1.04
TUBP50607 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TUBP50607 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.52■■□□□ 1.03
TUBP50607 PKD1P6-201ENST00000343738 4769 ntBASIC21.52■■□□□ 1.03
TUBP50607 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TUBP50607 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TUBP50607 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.51■■□□□ 1.03
TUBP50607 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.51■■□□□ 1.03
TUBP50607 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBP50607 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBP50607 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBP50607 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBP50607 FEM1AP4-201ENST00000443167 1987 ntBASIC21.51■■□□□ 1.03
TUBP50607 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.51■■□□□ 1.03
TUBP50607 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TUBP50607 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TUBP50607 DUSP5P2-201ENST00000426873 1033 ntBASIC21.51■■□□□ 1.03
TUBP50607 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.51■■□□□ 1.03
TUBP50607 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.51■■□□□ 1.03
TUBP50607 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TUBP50607 AC083880.1-201ENST00000608266 535 ntBASIC21.51■■□□□ 1.03
TUBP50607 AL589743.5-201ENST00000616611 1050 ntBASIC21.51■■□□□ 1.03
TUBP50607 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.51■■□□□ 1.03
TUBP50607 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.51■■□□□ 1.03
TUBP50607 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBP50607 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBP50607 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBP50607 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TUBP50607 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBP50607 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.5■■□□□ 1.03
TUBP50607 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.5■■□□□ 1.03
TUBP50607 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.5■■□□□ 1.03
TUBP50607 ABHD17AP1-201ENST00000358206 933 ntBASIC21.5■■□□□ 1.03
TUBP50607 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TUBP50607 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.5■■□□□ 1.03
TUBP50607 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.5■■□□□ 1.03
TUBP50607 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TUBP50607 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.5■■□□□ 1.03
TUBP50607 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TUBP50607 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBP50607 CYP21A1P-202ENST00000354927 1481 ntBASIC21.5■■□□□ 1.03
TUBP50607 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TUBP50607 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.5■■□□□ 1.03
TUBP50607 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TUBP50607 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TUBP50607 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBP50607 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TUBP50607 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TUBP50607 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBP50607 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBP50607 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.5■■□□□ 1.03
TUBP50607 KRT17P1-201ENST00000399211 1546 ntBASIC21.5■■□□□ 1.03
TUBP50607 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBP50607 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TUBP50607 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TUBP50607 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBP50607 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBP50607 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms