Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 MTR10YOR160W 2919 nt4.35□□□□□ -1.71
NUP42P49686 HDA3YPR179C 1968 nt4.34□□□□□ -1.71
NUP42P49686 DUF1YOL087C 3351 nt4.34□□□□□ -1.71
NUP42P49686 NTO1YPR031W 2247 nt4.34□□□□□ -1.71
NUP42P49686 SPB1YCL054W 2526 nt4.34□□□□□ -1.71
NUP42P49686 FMP32YFL046W 624 nt4.34□□□□□ -1.71
NUP42P49686 YMR324CYMR324C 243 nt4.34□□□□□ -1.71
NUP42P49686 PTA1YAL043C 2358 nt4.34□□□□□ -1.72
NUP42P49686 XRN1YGL173C 4587 nt4.34□□□□□ -1.72
NUP42P49686 YFL034WYFL034W 3222 nt4.33□□□□□ -1.72
NUP42P49686 LCD1YDR499W 2244 nt4.33□□□□□ -1.72
NUP42P49686 KAR3YPR141C 2190 nt4.33□□□□□ -1.72
NUP42P49686 NDC1YML031W 1968 nt4.33□□□□□ -1.72
NUP42P49686 MSR1YHR091C 1932 nt4.33□□□□□ -1.72
NUP42P49686 YDR193WYDR193W 399 nt4.33□□□□□ -1.72
NUP42P49686 YML007C-AYML007C-A 111 nt4.33□□□□□ -1.72
NUP42P49686 GIN4YDR507C 3429 nt4.33□□□□□ -1.72
NUP42P49686 PFK26YIL107C 2484 nt4.33□□□□□ -1.72
NUP42P49686 YDR524C-AYDR524C-A 120 nt4.32□□□□□ -1.72
NUP42P49686 LSO2YGR169C-A 279 nt4.32□□□□□ -1.72
NUP42P49686 SNU114YKL173W 3027 nt4.32□□□□□ -1.72
NUP42P49686 PHO2YDL106C 1680 nt4.32□□□□□ -1.72
NUP42P49686 SRP72YPL210C 1923 nt4.31□□□□□ -1.72
NUP42P49686 SUP19tS(UGA)E 82 nt4.31□□□□□ -1.72
NUP42P49686 SUP17tS(UGA)I 82 nt4.31□□□□□ -1.72
NUP42P49686 SUP16tS(UGA)P 82 nt4.31□□□□□ -1.72
NUP42P49686 GLT1YDL171C 6438 nt4.31□□□□□ -1.72
NUP42P49686 TUB2YFL037W 1374 nt4.3□□□□□ -1.72
NUP42P49686 NCL1YBL024W 2055 nt4.3□□□□□ -1.72
NUP42P49686 DOT6YER088C 2013 nt4.3□□□□□ -1.72
NUP42P49686 VTC1YER072W 390 nt4.3□□□□□ -1.72
NUP42P49686 YMR295CYMR295C 594 nt4.3□□□□□ -1.72
NUP42P49686 YBR224WYBR224W 516 nt4.3□□□□□ -1.72
NUP42P49686 LYP1YNL268W 1836 nt4.3□□□□□ -1.72
NUP42P49686 EPL1YFL024C 2499 nt4.3□□□□□ -1.72
NUP42P49686 PRR1YKL116C 1557 nt4.29□□□□□ -1.72
NUP42P49686 YDR426CYDR426C 378 nt4.29□□□□□ -1.72
NUP42P49686 YIL165CYIL165C 360 nt4.29□□□□□ -1.72
NUP42P49686 LRE1YCL051W 1752 nt4.29□□□□□ -1.72
NUP42P49686 AI5_ALPHAQ0070 1893 nt4.28□□□□□ -1.72
NUP42P49686 GEP4YHR100C 558 nt4.28□□□□□ -1.72
NUP42P49686 KIC1YHR102W 3243 nt4.28□□□□□ -1.72
NUP42P49686 BAS1YKR099W 2436 nt4.27□□□□□ -1.73
NUP42P49686 TAF6YGL112C 1551 nt4.27□□□□□ -1.73
NUP42P49686 PDE2YOR360C 1581 nt4.27□□□□□ -1.73
NUP42P49686 SNT2YGL131C 4212 nt4.27□□□□□ -1.73
NUP42P49686 TRX1YLR043C 312 nt4.27□□□□□ -1.73
NUP42P49686 ALK2YBL009W 2031 nt4.27□□□□□ -1.73
NUP42P49686 VMA1YDL185W 3216 nt4.27□□□□□ -1.73
NUP42P49686 PSO2YMR137C 1986 nt4.26□□□□□ -1.73
NUP42P49686 YOR015WYOR015W 360 nt4.26□□□□□ -1.73
NUP42P49686 FEX2YPL279C 1128 nt4.26□□□□□ -1.73
NUP42P49686 BOI1YBL085W 2943 nt4.26□□□□□ -1.73
NUP42P49686 YBR182C-AYBR182C-A 195 nt4.25□□□□□ -1.73
NUP42P49686 RPN2YIL075C 2838 nt4.24□□□□□ -1.73
NUP42P49686 GOT1YMR292W 417 nt4.24□□□□□ -1.73
NUP42P49686 YOR376WYOR376W 369 nt4.24□□□□□ -1.73
NUP42P49686 TAF7YMR227C 1773 nt4.24□□□□□ -1.73
NUP42P49686 UPS1YLR193C 528 nt4.23□□□□□ -1.73
NUP42P49686 YLR255CYLR255C 354 nt4.23□□□□□ -1.73
NUP42P49686 YNL097W-AYNL097W-A 156 nt4.23□□□□□ -1.73
NUP42P49686 SEC5YDR166C 2916 nt4.23□□□□□ -1.73
NUP42P49686 TOF2YKR010C 2316 nt4.22□□□□□ -1.73
NUP42P49686 CDC27YBL084C 2277 nt4.22□□□□□ -1.73
NUP42P49686 YGL069CYGL069C 465 nt4.22□□□□□ -1.73
NUP42P49686 FPR1YNL135C 345 nt4.22□□□□□ -1.73
NUP42P49686 YOR381W-AYOR381W-A 168 nt4.22□□□□□ -1.73
NUP42P49686 VPS53YJL029C 2469 nt4.21□□□□□ -1.73
NUP42P49686 TRM2YKR056W 1920 nt4.21□□□□□ -1.74
NUP42P49686 SKG6YHR149C 2205 nt4.21□□□□□ -1.74
NUP42P49686 PHM6YDR281C 315 nt4.21□□□□□ -1.74
NUP42P49686 ERP6YGL002W 651 nt4.21□□□□□ -1.74
NUP42P49686 SMD1YGR074W 441 nt4.21□□□□□ -1.74
NUP42P49686 YTA7YGR270W 4140 nt4.21□□□□□ -1.74
NUP42P49686 RAD4YER162C 2265 nt4.2□□□□□ -1.74
NUP42P49686 snR46snR46 197 nt4.2□□□□□ -1.74
NUP42P49686 FAS1YKL182W 6156 nt4.2□□□□□ -1.74
NUP42P49686 KRE5YOR336W 4098 nt4.2□□□□□ -1.74
NUP42P49686 RAT1YOR048C 3021 nt4.2□□□□□ -1.74
NUP42P49686 SYT1YPR095C 3681 nt4.2□□□□□ -1.74
NUP42P49686 SGD1YLR336C 2700 nt4.2□□□□□ -1.74
NUP42P49686 ECM22YLR228C 2445 nt4.19□□□□□ -1.74
NUP42P49686 YGL217CYGL217C 342 nt4.19□□□□□ -1.74
NUP42P49686 snR52snR52 92 nt4.19□□□□□ -1.74
NUP42P49686 KAP114YGL241W 3015 nt4.19□□□□□ -1.74
NUP42P49686 ITC1YGL133W 3795 nt4.19□□□□□ -1.74
NUP42P49686 GUP1YGL084C 1683 nt4.19□□□□□ -1.74
NUP42P49686 YDR015CYDR015C 240 nt4.18□□□□□ -1.74
NUP42P49686 SSS1YDR086C 243 nt4.18□□□□□ -1.74
NUP42P49686 YDR286CYDR286C 345 nt4.18□□□□□ -1.74
NUP42P49686 PRE4YFR050C 801 nt4.18□□□□□ -1.74
NUP42P49686 RPL25YOL127W 429 nt4.18□□□□□ -1.74
NUP42P49686 YPR002C-AYPR002C-A 198 nt4.18□□□□□ -1.74
NUP42P49686 YPR092WYPR092W 306 nt4.18□□□□□ -1.74
NUP42P49686 NUT2YPR168W 474 nt4.18□□□□□ -1.74
NUP42P49686 VMA9YCL005W-A 222 nt4.18□□□□□ -1.74
NUP42P49686 ASG1YIL130W 2895 nt4.18□□□□□ -1.74
NUP42P49686 CUL3YGR003W 2235 nt4.17□□□□□ -1.74
NUP42P49686 RLI1YDR091C 1827 nt4.17□□□□□ -1.74
NUP42P49686 YGL014C-AYGL014C-A 162 nt4.17□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 37.7 ms