Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YGL039WYGL039W 1047 nt0.84□□□□□ -2.27
VPS55P47111 RPL34BYIL052C 366 nt0.84□□□□□ -2.27
VPS55P47111 FCF2YLR051C 654 nt0.84□□□□□ -2.27
VPS55P47111 RIF2YLR453C 1188 nt0.84□□□□□ -2.27
VPS55P47111 CMC2YBL059C-A 330 nt0.84□□□□□ -2.27
VPS55P47111 YOL050CYOL050C 321 nt0.84□□□□□ -2.27
VPS55P47111 HMI1YOL095C 2121 nt0.83□□□□□ -2.28
VPS55P47111 IRR1YIL026C 3453 nt0.83□□□□□ -2.28
VPS55P47111 PSO2YMR137C 1986 nt0.83□□□□□ -2.28
VPS55P47111 FUS2YMR232W 2034 nt0.83□□□□□ -2.28
VPS55P47111 CIC1YHR052W 1131 nt0.83□□□□□ -2.28
VPS55P47111 YJL015CYJL015C 285 nt0.83□□□□□ -2.28
VPS55P47111 YNL089CYNL089C 477 nt0.83□□□□□ -2.28
VPS55P47111 CUP9YPL177C 921 nt0.83□□□□□ -2.28
VPS55P47111 ASM4YDL088C 1587 nt0.83□□□□□ -2.28
VPS55P47111 SHE9YDR393W 1371 nt0.83□□□□□ -2.28
VPS55P47111 FRK1YPL141C 2598 nt0.82□□□□□ -2.28
VPS55P47111 CRM1YGR218W 3255 nt0.82□□□□□ -2.28
VPS55P47111 APL2YKL135C 2181 nt0.82□□□□□ -2.28
VPS55P47111 MVB12YGR206W 306 nt0.82□□□□□ -2.28
VPS55P47111 YHR022CYHR022C 771 nt0.82□□□□□ -2.28
VPS55P47111 MCM22YJR135C 720 nt0.82□□□□□ -2.28
VPS55P47111 VPS28YPL065W 729 nt0.82□□□□□ -2.28
VPS55P47111 SAC3YDR159W 3906 nt0.82□□□□□ -2.28
VPS55P47111 VMR1YHL035C 4779 nt0.81□□□□□ -2.28
VPS55P47111 RPS26BYER131W 360 nt0.81□□□□□ -2.28
VPS55P47111 MSL1YIR009W 336 nt0.81□□□□□ -2.28
VPS55P47111 MLH3YPL164C 2148 nt0.81□□□□□ -2.28
VPS55P47111 MUM2YBR057C 1101 nt0.81□□□□□ -2.28
VPS55P47111 APM3YBR288C 1452 nt0.8□□□□□ -2.28
VPS55P47111 UBP11YKR098C 2154 nt0.8□□□□□ -2.28
VPS55P47111 SPO22YIL073C 2928 nt0.8□□□□□ -2.28
VPS55P47111 LSM6YDR378C 261 nt0.8□□□□□ -2.28
VPS55P47111 ARG3YJL088W 1017 nt0.8□□□□□ -2.28
VPS55P47111 ADF1YCL058W-A 342 nt0.8□□□□□ -2.28
VPS55P47111 SCC2YDR180W 4482 nt0.8□□□□□ -2.28
VPS55P47111 YSW1YBR148W 1830 nt0.8□□□□□ -2.28
VPS55P47111 COX1Q0045 1605 nt0.79□□□□□ -2.28
VPS55P47111 CDC5YMR001C 2118 nt0.79□□□□□ -2.28
VPS55P47111 EST2YLR318W 2655 nt0.79□□□□□ -2.28
VPS55P47111 YDR286CYDR286C 345 nt0.79□□□□□ -2.28
VPS55P47111 STF2YGR008C 255 nt0.79□□□□□ -2.28
VPS55P47111 GTR2YGR163W 1026 nt0.79□□□□□ -2.28
VPS55P47111 FIP1YJR093C 984 nt0.79□□□□□ -2.28
VPS55P47111 RRT15YLR162W-A 189 nt0.79□□□□□ -2.28
VPS55P47111 GPN3YLR243W 819 nt0.79□□□□□ -2.28
VPS55P47111 NOP15YNL110C 663 nt0.79□□□□□ -2.28
VPS55P47111 PEX27YOR193W 1131 nt0.79□□□□□ -2.28
VPS55P47111 NST1YNL091W 3723 nt0.79□□□□□ -2.28
VPS55P47111 MSH5YDL154W 2706 nt0.79□□□□□ -2.28
VPS55P47111 snR63snR63 255 nt0.78□□□□□ -2.28
VPS55P47111 YDR042CYDR042C 603 nt0.78□□□□□ -2.28
VPS55P47111 YER091C-AYER091C-A 222 nt0.78□□□□□ -2.28
VPS55P47111 YGL006W-AYGL006W-A 111 nt0.78□□□□□ -2.28
VPS55P47111 SRP21YKL122C 504 nt0.78□□□□□ -2.28
VPS55P47111 YPT52YKR014C 705 nt0.78□□□□□ -2.28
VPS55P47111 IRC19YLL033W 693 nt0.78□□□□□ -2.28
VPS55P47111 YMR242W-AYMR242W-A 90 nt0.78□□□□□ -2.28
VPS55P47111 YNL114CYNL114C 372 nt0.78□□□□□ -2.28
VPS55P47111 NOP53YPL146C 1368 nt0.78□□□□□ -2.28
VPS55P47111 YHR214C-CYHR214C-C 1437 nt0.78□□□□□ -2.28
VPS55P47111 BEM2YER155C 6504 nt0.78□□□□□ -2.29
VPS55P47111 YNL034WYNL034W 1839 nt0.78□□□□□ -2.29
VPS55P47111 MSS11YMR164C 2277 nt0.77□□□□□ -2.29
VPS55P47111 IRE1YHR079C 3348 nt0.77□□□□□ -2.29
VPS55P47111 YDR199WYDR199W 366 nt0.77□□□□□ -2.29
VPS55P47111 FSH1YHR049W 732 nt0.77□□□□□ -2.29
VPS55P47111 HUG1YML058W-A 207 nt0.77□□□□□ -2.29
VPS55P47111 EAF7YNL136W 1278 nt0.77□□□□□ -2.29
VPS55P47111 TEX1YNL253W 1269 nt0.77□□□□□ -2.29
VPS55P47111 GRX7YBR014C 612 nt0.77□□□□□ -2.29
VPS55P47111 YOR152CYOR152C 771 nt0.77□□□□□ -2.29
VPS55P47111 RPB5YBR154C 648 nt0.77□□□□□ -2.29
VPS55P47111 ROM2YLR371W 4071 nt0.77□□□□□ -2.29
VPS55P47111 MSN5YDR335W 3675 nt0.76□□□□□ -2.29
VPS55P47111 YJL049WYJL049W 1353 nt0.76□□□□□ -2.29
VPS55P47111 YPD1YDL235C 504 nt0.76□□□□□ -2.29
VPS55P47111 MTC7YEL033W 420 nt0.76□□□□□ -2.29
VPS55P47111 YIR023C-AYIR023C-A 324 nt0.76□□□□□ -2.29
VPS55P47111 YLR366WYLR366W 306 nt0.76□□□□□ -2.29
VPS55P47111 RRT16YNL105W 429 nt0.76□□□□□ -2.29
VPS55P47111 RPN8YOR261C 1017 nt0.76□□□□□ -2.29
VPS55P47111 CDC24YAL041W 2565 nt0.75□□□□□ -2.29
VPS55P47111 KAP122YGL016W 3246 nt0.75□□□□□ -2.29
VPS55P47111 AHC2YCR082W 387 nt0.75□□□□□ -2.29
VPS55P47111 BNA7YDR428C 786 nt0.75□□□□□ -2.29
VPS55P47111 YGL177WYGL177W 348 nt0.75□□□□□ -2.29
VPS55P47111 RNR4YGR180C 1038 nt0.75□□□□□ -2.29
VPS55P47111 SFM1YOR021C 642 nt0.75□□□□□ -2.29
VPS55P47111 ARL3YPL051W 597 nt0.75□□□□□ -2.29
VPS55P47111 NCA2YPR155C 1851 nt0.75□□□□□ -2.29
VPS55P47111 YAR009CYAR009C 3591 nt0.75□□□□□ -2.29
VPS55P47111 NUP145YGL092W 3954 nt0.74□□□□□ -2.29
VPS55P47111 SEF1YBL066C 3447 nt0.74□□□□□ -2.29
VPS55P47111 YDR461C-AYDR461C-A 243 nt0.74□□□□□ -2.29
VPS55P47111 BUD19YJL188C 309 nt0.74□□□□□ -2.29
VPS55P47111 CYB5YNL111C 363 nt0.74□□□□□ -2.29
VPS55P47111 MIX23YBL107C 591 nt0.74□□□□□ -2.29
VPS55P47111 PET123YOR158W 957 nt0.74□□□□□ -2.29
VPS55P47111 YOR394C-AYOR394C-A 168 nt0.74□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 21.9 ms