Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.06■□□□□ 0
CKS2P33552 AC098818.2-201ENST00000564925 2320 ntBASIC15.05■□□□□ 0
CKS2P33552 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.05■□□□□ 0
CKS2P33552 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CKS2P33552 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.05■□□□□ 0
CKS2P33552 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CKS2P33552 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.05■□□□□ -0
CKS2P33552 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS2P33552 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.04■□□□□ -0
CKS2P33552 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CKS2P33552 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CKS2P33552 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.04■□□□□ -0
CKS2P33552 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.04■□□□□ -0
CKS2P33552 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.04■□□□□ -0
CKS2P33552 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.04■□□□□ -0
CKS2P33552 MTDHP2-201ENST00000601468 714 ntBASIC15.04■□□□□ -0
CKS2P33552 pRNA.6-201ENST00000610482 90 ntBASIC15.04■□□□□ -0
CKS2P33552 pRNA.5-201ENST00000612139 90 ntBASIC15.04■□□□□ -0
CKS2P33552 pRNA.11-201ENST00000618423 90 ntBASIC15.04■□□□□ -0
CKS2P33552 pRNA.13-201ENST00000619112 90 ntBASIC15.04■□□□□ -0
CKS2P33552 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CKS2P33552 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CKS2P33552 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CKS2P33552 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CKS2P33552 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CKS2P33552 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CKS2P33552 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.03■□□□□ -0
CKS2P33552 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CKS2P33552 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.03■□□□□ -0
CKS2P33552 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CKS2P33552 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CKS2P33552 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS2P33552 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CKS2P33552 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.03■□□□□ -0
CKS2P33552 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.03■□□□□ -0
CKS2P33552 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS2P33552 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CKS2P33552 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.03■□□□□ -0
CKS2P33552 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CKS2P33552 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.03■□□□□ -0
CKS2P33552 TSPY13P-201ENST00000338964 914 ntBASIC15.03■□□□□ -0
CKS2P33552 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.03■□□□□ -0
CKS2P33552 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CKS2P33552 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.03■□□□□ -0
CKS2P33552 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.03■□□□□ -0
CKS2P33552 AL031848.2-201ENST00000607670 837 ntBASIC15.03■□□□□ -0
CKS2P33552 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.03■□□□□ -0
CKS2P33552 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CKS2P33552 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.03■□□□□ -0
CKS2P33552 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS2P33552 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CKS2P33552 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CKS2P33552 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CKS2P33552 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CKS2P33552 KRT8P33-201ENST00000508125 1423 ntBASIC15.02■□□□□ -0
CKS2P33552 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.02■□□□□ -0
CKS2P33552 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.02■□□□□ -0
CKS2P33552 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CKS2P33552 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CKS2P33552 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.02■□□□□ -0
CKS2P33552 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CKS2P33552 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC15.02■□□□□ -0
CKS2P33552 AC103834.1-201ENST00000520383 144 ntBASIC15.02■□□□□ -0
CKS2P33552 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CKS2P33552 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.02□□□□□ -0.01
CKS2P33552 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CKS2P33552 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.02□□□□□ -0.01
CKS2P33552 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
CKS2P33552 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CKS2P33552 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CKS2P33552 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CKS2P33552 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CKS2P33552 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CKS2P33552 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.02□□□□□ -0.01
CKS2P33552 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.01□□□□□ -0.01
CKS2P33552 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.01□□□□□ -0.01
CKS2P33552 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms