Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
COL8A2P25067 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.31■□□□□ 0.36
COL8A2P25067 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.31■□□□□ 0.36
COL8A2P25067 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
COL8A2P25067 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.31■□□□□ 0.36
COL8A2P25067 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL8A2P25067 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.31■□□□□ 0.36
COL8A2P25067 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.3■□□□□ 0.36
COL8A2P25067 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COL8A2P25067 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COL8A2P25067 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COL8A2P25067 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.3■□□□□ 0.36
COL8A2P25067 POU5F1P3-201ENST00000428824 1078 ntBASIC17.3■□□□□ 0.36
COL8A2P25067 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.3■□□□□ 0.36
COL8A2P25067 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
COL8A2P25067 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.3■□□□□ 0.36
COL8A2P25067 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COL8A2P25067 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
COL8A2P25067 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.3■□□□□ 0.36
COL8A2P25067 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COL8A2P25067 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
COL8A2P25067 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL8A2P25067 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.29■□□□□ 0.36
COL8A2P25067 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COL8A2P25067 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL8A2P25067 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COL8A2P25067 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COL8A2P25067 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL8A2P25067 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL8A2P25067 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL8A2P25067 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.29■□□□□ 0.36
COL8A2P25067 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.29■□□□□ 0.36
COL8A2P25067 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.29■□□□□ 0.36
COL8A2P25067 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.29■□□□□ 0.36
COL8A2P25067 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.29■□□□□ 0.36
COL8A2P25067 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
COL8A2P25067 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL8A2P25067 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COL8A2P25067 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL8A2P25067 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL8A2P25067 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
COL8A2P25067 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.28■□□□□ 0.36
COL8A2P25067 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL8A2P25067 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
COL8A2P25067 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL8A2P25067 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL8A2P25067 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.28■□□□□ 0.36
COL8A2P25067 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.28■□□□□ 0.36
COL8A2P25067 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL8A2P25067 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.28■□□□□ 0.36
COL8A2P25067 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.28■□□□□ 0.36
COL8A2P25067 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.28■□□□□ 0.36
COL8A2P25067 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL8A2P25067 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL8A2P25067 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.28■□□□□ 0.36
COL8A2P25067 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL8A2P25067 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL8A2P25067 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
COL8A2P25067 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL8A2P25067 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.27■□□□□ 0.36
COL8A2P25067 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.27■□□□□ 0.36
COL8A2P25067 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL8A2P25067 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
COL8A2P25067 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL8A2P25067 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
COL8A2P25067 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.27■□□□□ 0.36
COL8A2P25067 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL8A2P25067 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL8A2P25067 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL8A2P25067 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL8A2P25067 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL8A2P25067 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
COL8A2P25067 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL8A2P25067 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
COL8A2P25067 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.27■□□□□ 0.35
COL8A2P25067 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL8A2P25067 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
COL8A2P25067 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL8A2P25067 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL8A2P25067 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
COL8A2P25067 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL8A2P25067 AC026310.3-201ENST00000625186 2373 ntBASIC17.26■□□□□ 0.35
COL8A2P25067 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms