Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRM3P20309 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRM3P20309 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRM3P20309 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRM3P20309 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRM3P20309 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRM3P20309 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRM3P20309 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRM3P20309 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHRM3P20309 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRM3P20309 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRM3P20309 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRM3P20309 AC091799.1-201ENST00000422823 811 ntBASIC20.34■□□□□ 0.85
CHRM3P20309 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CHRM3P20309 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.34■□□□□ 0.85
CHRM3P20309 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRM3P20309 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CHRM3P20309 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRM3P20309 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRM3P20309 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRM3P20309 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRM3P20309 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CHRM3P20309 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRM3P20309 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CHRM3P20309 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRM3P20309 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.33■□□□□ 0.85
CHRM3P20309 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHRM3P20309 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.33■□□□□ 0.85
CHRM3P20309 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CHRM3P20309 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRM3P20309 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CHRM3P20309 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRM3P20309 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHRM3P20309 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.33■□□□□ 0.85
CHRM3P20309 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CHRM3P20309 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.33■□□□□ 0.84
CHRM3P20309 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHRM3P20309 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHRM3P20309 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHRM3P20309 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHRM3P20309 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.33■□□□□ 0.84
CHRM3P20309 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CHRM3P20309 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRM3P20309 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CHRM3P20309 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRM3P20309 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.32■□□□□ 0.84
CHRM3P20309 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHRM3P20309 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHRM3P20309 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.32■□□□□ 0.84
CHRM3P20309 MIR935-201ENST00000401179 91 ntBASIC20.32■□□□□ 0.84
CHRM3P20309 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.32■□□□□ 0.84
CHRM3P20309 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.32■□□□□ 0.84
CHRM3P20309 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CHRM3P20309 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRM3P20309 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.32■□□□□ 0.84
CHRM3P20309 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRM3P20309 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CHRM3P20309 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRM3P20309 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.32■□□□□ 0.84
CHRM3P20309 LINC01006-201ENST00000333319 2292 ntBASIC20.32■□□□□ 0.84
CHRM3P20309 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CHRM3P20309 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHRM3P20309 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRM3P20309 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRM3P20309 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRM3P20309 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRM3P20309 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRM3P20309 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRM3P20309 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.31■□□□□ 0.84
CHRM3P20309 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.31■□□□□ 0.84
CHRM3P20309 TERF1P5-201ENST00000477545 1207 ntBASIC20.31■□□□□ 0.84
CHRM3P20309 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CHRM3P20309 AC010536.3-201ENST00000620306 533 ntBASIC20.31■□□□□ 0.84
CHRM3P20309 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRM3P20309 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRM3P20309 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHRM3P20309 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRM3P20309 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CHRM3P20309 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.31■□□□□ 0.84
CHRM3P20309 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHRM3P20309 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.31■□□□□ 0.84
CHRM3P20309 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHRM3P20309 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRM3P20309 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CHRM3P20309 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CHRM3P20309 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHRM3P20309 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHRM3P20309 AC007322.3-201ENST00000426526 701 ntBASIC20.3■□□□□ 0.84
CHRM3P20309 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHRM3P20309 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRM3P20309 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRM3P20309 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRM3P20309 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.3■□□□□ 0.84
CHRM3P20309 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRM3P20309 AC027702.1-201ENST00000563810 1770 ntBASIC20.3■□□□□ 0.84
CHRM3P20309 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHRM3P20309 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.3■□□□□ 0.84
CHRM3P20309 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHRM3P20309 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHRM3P20309 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms