Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VCLP18206 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCLP18206 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.53■□□□□ 0.88
VCLP18206 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCLP18206 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VCLP18206 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VCLP18206 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VCLP18206 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VCLP18206 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VCLP18206 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.52■□□□□ 0.88
VCLP18206 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VCLP18206 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
VCLP18206 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.52■□□□□ 0.88
VCLP18206 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.52■□□□□ 0.88
VCLP18206 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.52■□□□□ 0.88
VCLP18206 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.52■□□□□ 0.88
VCLP18206 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.52■□□□□ 0.88
VCLP18206 AC243732.1-201ENST00000612648 864 ntBASIC20.52■□□□□ 0.88
VCLP18206 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
VCLP18206 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VCLP18206 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VCLP18206 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VCLP18206 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
VCLP18206 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
VCLP18206 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VCLP18206 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VCLP18206 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VCLP18206 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.51■□□□□ 0.87
VCLP18206 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VCLP18206 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.51■□□□□ 0.87
VCLP18206 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VCLP18206 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.51■□□□□ 0.87
VCLP18206 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.51■□□□□ 0.87
VCLP18206 AC006970.2-201ENST00000450065 779 ntBASIC20.51■□□□□ 0.87
VCLP18206 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.51■□□□□ 0.87
VCLP18206 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.51■□□□□ 0.87
VCLP18206 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VCLP18206 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.51■□□□□ 0.87
VCLP18206 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.51■□□□□ 0.87
VCLP18206 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VCLP18206 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VCLP18206 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VCLP18206 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VCLP18206 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VCLP18206 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.5■□□□□ 0.87
VCLP18206 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
VCLP18206 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VCLP18206 RAP2CP1-201ENST00000605103 478 ntBASIC20.5■□□□□ 0.87
VCLP18206 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
VCLP18206 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VCLP18206 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VCLP18206 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VCLP18206 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VCLP18206 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.5■□□□□ 0.87
VCLP18206 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.5■□□□□ 0.87
VCLP18206 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VCLP18206 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
VCLP18206 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VCLP18206 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VCLP18206 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VCLP18206 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.49■□□□□ 0.87
VCLP18206 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.49■□□□□ 0.87
VCLP18206 AC007322.4-201ENST00000509611 723 ntBASIC20.49■□□□□ 0.87
VCLP18206 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.49■□□□□ 0.87
VCLP18206 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VCLP18206 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VCLP18206 RBM17P2-201ENST00000616397 1405 ntBASIC20.49■□□□□ 0.87
VCLP18206 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
VCLP18206 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VCLP18206 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VCLP18206 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VCLP18206 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.49■□□□□ 0.87
VCLP18206 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VCLP18206 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VCLP18206 LINC01006-201ENST00000333319 2292 ntBASIC20.48■□□□□ 0.87
VCLP18206 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCLP18206 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCLP18206 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.48■□□□□ 0.87
VCLP18206 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCLP18206 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCLP18206 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCLP18206 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VCLP18206 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.48■□□□□ 0.87
VCLP18206 AC005181.1-201ENST00000604782 1256 ntBASIC20.48■□□□□ 0.87
VCLP18206 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCLP18206 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCLP18206 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCLP18206 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCLP18206 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
VCLP18206 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.47■□□□□ 0.87
VCLP18206 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCLP18206 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.47■□□□□ 0.87
VCLP18206 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.47■□□□□ 0.87
VCLP18206 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VCLP18206 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.47■□□□□ 0.87
VCLP18206 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCLP18206 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.47■□□□□ 0.87
VCLP18206 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCLP18206 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VCLP18206 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms