Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-EP13747 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-EP13747 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-EP13747 GCSHP5-201ENST00000443090 522 ntBASIC20.76■□□□□ 0.91
HLA-EP13747 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HLA-EP13747 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.76■□□□□ 0.91
HLA-EP13747 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.76■□□□□ 0.91
HLA-EP13747 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-EP13747 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-EP13747 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-EP13747 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-EP13747 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-EP13747 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-EP13747 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.76■□□□□ 0.91
HLA-EP13747 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-EP13747 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-EP13747 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.75■□□□□ 0.91
HLA-EP13747 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.75■□□□□ 0.91
HLA-EP13747 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HLA-EP13747 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-EP13747 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HLA-EP13747 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.75■□□□□ 0.91
HLA-EP13747 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.75■□□□□ 0.91
HLA-EP13747 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.75■□□□□ 0.91
HLA-EP13747 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.75■□□□□ 0.91
HLA-EP13747 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.75■□□□□ 0.91
HLA-EP13747 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-EP13747 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-EP13747 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HLA-EP13747 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-EP13747 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-EP13747 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HLA-EP13747 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.74■□□□□ 0.91
HLA-EP13747 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-EP13747 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-EP13747 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-EP13747 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HLA-EP13747 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-EP13747 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HLA-EP13747 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.74■□□□□ 0.91
HLA-EP13747 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-EP13747 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HLA-EP13747 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-EP13747 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
HLA-EP13747 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-EP13747 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.74■□□□□ 0.91
HLA-EP13747 AC142381.4-202ENST00000563973 229 ntBASIC20.74■□□□□ 0.91
HLA-EP13747 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.74■□□□□ 0.91
HLA-EP13747 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HLA-EP13747 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HLA-EP13747 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HLA-EP13747 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.73■□□□□ 0.91
HLA-EP13747 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-EP13747 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-EP13747 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.73■□□□□ 0.91
HLA-EP13747 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-EP13747 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.73■□□□□ 0.91
HLA-EP13747 C2orf69P4-201ENST00000565394 541 ntBASIC20.73■□□□□ 0.91
HLA-EP13747 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.73■□□□□ 0.91
HLA-EP13747 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HLA-EP13747 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-EP13747 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.73■□□□□ 0.91
HLA-EP13747 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
HLA-EP13747 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-EP13747 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HLA-EP13747 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-EP13747 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-EP13747 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.72■□□□□ 0.91
HLA-EP13747 UNC93B4-201ENST00000505679 747 ntBASIC20.72■□□□□ 0.91
HLA-EP13747 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-EP13747 SOX15-203ENST00000570788 1093 ntBASIC20.72■□□□□ 0.91
HLA-EP13747 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.72■□□□□ 0.91
HLA-EP13747 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.72■□□□□ 0.91
HLA-EP13747 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HLA-EP13747 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-EP13747 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-EP13747 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.72■□□□□ 0.91
HLA-EP13747 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HLA-EP13747 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HLA-EP13747 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-EP13747 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-EP13747 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-EP13747 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-EP13747 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-EP13747 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-EP13747 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
HLA-EP13747 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.71■□□□□ 0.91
HLA-EP13747 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-EP13747 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms