Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH1P12830 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDH1P12830 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDH1P12830 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH1P12830 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH1P12830 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH1P12830 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH1P12830 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CDH1P12830 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH1P12830 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH1P12830 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH1P12830 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CDH1P12830 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDH1P12830 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CDH1P12830 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH1P12830 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CDH1P12830 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CDH1P12830 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH1P12830 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH1P12830 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CDH1P12830 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH1P12830 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH1P12830 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH1P12830 AC004911.1-201ENST00000416316 871 ntBASIC19.91■□□□□ 0.78
CDH1P12830 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH1P12830 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH1P12830 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH1P12830 DUX4L16-201ENST00000555130 1264 ntBASIC19.91■□□□□ 0.78
CDH1P12830 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.91■□□□□ 0.78
CDH1P12830 AL137784.2-201ENST00000607332 1000 ntBASIC19.91■□□□□ 0.78
CDH1P12830 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CDH1P12830 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.91■□□□□ 0.78
CDH1P12830 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.91■□□□□ 0.78
CDH1P12830 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDH1P12830 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH1P12830 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH1P12830 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH1P12830 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.9■□□□□ 0.78
CDH1P12830 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH1P12830 AC011484.1-201ENST00000377652 1995 ntBASIC19.9■□□□□ 0.78
CDH1P12830 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDH1P12830 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH1P12830 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH1P12830 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH1P12830 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.9■□□□□ 0.78
CDH1P12830 AC013268.1-206ENST00000638368 961 ntBASIC19.9■□□□□ 0.78
CDH1P12830 AC112229.1-201ENST00000639295 961 ntBASIC19.9■□□□□ 0.78
CDH1P12830 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDH1P12830 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDH1P12830 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH1P12830 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH1P12830 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
CDH1P12830 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CDH1P12830 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDH1P12830 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
CDH1P12830 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDH1P12830 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
CDH1P12830 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH1P12830 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH1P12830 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CDH1P12830 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH1P12830 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDH1P12830 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH1P12830 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH1P12830 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDH1P12830 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH1P12830 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CDH1P12830 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.89■□□□□ 0.77
CDH1P12830 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDH1P12830 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH1P12830 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDH1P12830 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH1P12830 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 AC116050.2-201ENST00000612102 1779 ntBASIC19.88■□□□□ 0.77
CDH1P12830 AC006128.1-201ENST00000624704 1661 ntBASIC19.88■□□□□ 0.77
CDH1P12830 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
CDH1P12830 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.88■□□□□ 0.77
CDH1P12830 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms