Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRPL3P09001 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.33■□□□□ 0.53
MRPL3P09001 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
MRPL3P09001 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL3P09001 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.33■□□□□ 0.52
MRPL3P09001 AF213884.3-201ENST00000563833 479 ntBASIC18.33■□□□□ 0.52
MRPL3P09001 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL3P09001 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL3P09001 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL3P09001 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL3P09001 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL3P09001 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
MRPL3P09001 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL3P09001 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.33■□□□□ 0.52
MRPL3P09001 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL3P09001 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MRPL3P09001 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MRPL3P09001 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL3P09001 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL3P09001 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MRPL3P09001 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL3P09001 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL3P09001 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL3P09001 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.32■□□□□ 0.52
MRPL3P09001 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.32■□□□□ 0.52
MRPL3P09001 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.32■□□□□ 0.52
MRPL3P09001 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.32■□□□□ 0.52
MRPL3P09001 AC106739.1-201ENST00000617035 715 ntBASIC18.32■□□□□ 0.52
MRPL3P09001 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.32■□□□□ 0.52
MRPL3P09001 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
MRPL3P09001 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL3P09001 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL3P09001 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
MRPL3P09001 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL3P09001 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL3P09001 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.32■□□□□ 0.52
MRPL3P09001 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL3P09001 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MRPL3P09001 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MRPL3P09001 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.31■□□□□ 0.52
MRPL3P09001 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
MRPL3P09001 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.31■□□□□ 0.52
MRPL3P09001 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.31■□□□□ 0.52
MRPL3P09001 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.31■□□□□ 0.52
MRPL3P09001 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.31■□□□□ 0.52
MRPL3P09001 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.31■□□□□ 0.52
MRPL3P09001 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.31■□□□□ 0.52
MRPL3P09001 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.31■□□□□ 0.52
MRPL3P09001 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL3P09001 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 RASA4CP-201ENST00000424092 1398 ntBASIC18.3■□□□□ 0.52
MRPL3P09001 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.3■□□□□ 0.52
MRPL3P09001 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.3■□□□□ 0.52
MRPL3P09001 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MRPL3P09001 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MRPL3P09001 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 EDA-201ENST00000338901 1233 ntBASIC18.3■□□□□ 0.52
MRPL3P09001 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.3■□□□□ 0.52
MRPL3P09001 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.3■□□□□ 0.52
MRPL3P09001 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.3■□□□□ 0.52
MRPL3P09001 AC092720.2-201ENST00000602388 1665 ntBASIC18.3■□□□□ 0.52
MRPL3P09001 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.3■□□□□ 0.52
MRPL3P09001 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.3■□□□□ 0.52
MRPL3P09001 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MRPL3P09001 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.3■□□□□ 0.52
MRPL3P09001 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL3P09001 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPL3P09001 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPL3P09001 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.29■□□□□ 0.52
MRPL3P09001 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPL3P09001 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.29■□□□□ 0.52
MRPL3P09001 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
MRPL3P09001 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MRPL3P09001 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.29■□□□□ 0.52
MRPL3P09001 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPL3P09001 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms