Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR1AP08908 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HTR1AP08908 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HTR1AP08908 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
HTR1AP08908 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR1AP08908 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
HTR1AP08908 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR1AP08908 AC010525.1-201ENST00000585559 441 ntBASIC18.66■□□□□ 0.58
HTR1AP08908 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR1AP08908 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR1AP08908 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.66■□□□□ 0.58
HTR1AP08908 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR1AP08908 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.65■□□□□ 0.58
HTR1AP08908 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HTR1AP08908 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.65■□□□□ 0.58
HTR1AP08908 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.65■□□□□ 0.58
HTR1AP08908 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.65■□□□□ 0.58
HTR1AP08908 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 AC005332.7-201ENST00000614046 2005 ntBASIC18.65■□□□□ 0.58
HTR1AP08908 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR1AP08908 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HTR1AP08908 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.65■□□□□ 0.58
HTR1AP08908 NEFHP1-201ENST00000412845 2629 ntBASIC18.65■□□□□ 0.58
HTR1AP08908 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HTR1AP08908 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HTR1AP08908 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.64■□□□□ 0.58
HTR1AP08908 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1AP08908 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1AP08908 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HTR1AP08908 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.64■□□□□ 0.57
HTR1AP08908 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.64■□□□□ 0.57
HTR1AP08908 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HTR1AP08908 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.64■□□□□ 0.57
HTR1AP08908 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1AP08908 MIR3621-201ENST00000580529 85 ntBASIC18.64■□□□□ 0.57
HTR1AP08908 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.64■□□□□ 0.57
HTR1AP08908 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1AP08908 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1AP08908 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.64■□□□□ 0.57
HTR1AP08908 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1AP08908 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
HTR1AP08908 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1AP08908 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1AP08908 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1AP08908 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HTR1AP08908 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1AP08908 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTR1AP08908 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
HTR1AP08908 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
HTR1AP08908 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HTR1AP08908 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.63■□□□□ 0.57
HTR1AP08908 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.63■□□□□ 0.57
HTR1AP08908 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR1AP08908 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR1AP08908 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HTR1AP08908 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HTR1AP08908 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR1AP08908 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1AP08908 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR1AP08908 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HTR1AP08908 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1AP08908 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1AP08908 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms