Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN1P07384 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CAPN1P07384 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN1P07384 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN1P07384 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN1P07384 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN1P07384 AC073314.1-201ENST00000568729 2216 ntBASIC20.1■□□□□ 0.81
CAPN1P07384 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CAPN1P07384 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CAPN1P07384 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN1P07384 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.09■□□□□ 0.81
CAPN1P07384 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN1P07384 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.09■□□□□ 0.81
CAPN1P07384 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.09■□□□□ 0.81
CAPN1P07384 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.09■□□□□ 0.81
CAPN1P07384 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN1P07384 AL050303.2-201ENST00000619798 666 ntBASIC20.09■□□□□ 0.81
CAPN1P07384 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CAPN1P07384 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN1P07384 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN1P07384 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
CAPN1P07384 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN1P07384 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN1P07384 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN1P07384 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN1P07384 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN1P07384 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN1P07384 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CAPN1P07384 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN1P07384 AP005212.1-201ENST00000581547 1997 ntBASIC20.08■□□□□ 0.8
CAPN1P07384 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN1P07384 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CAPN1P07384 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.08■□□□□ 0.8
CAPN1P07384 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.07■□□□□ 0.8
CAPN1P07384 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN1P07384 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CAPN1P07384 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CAPN1P07384 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CAPN1P07384 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN1P07384 KRT18P20-201ENST00000548986 1279 ntBASIC20.07■□□□□ 0.8
CAPN1P07384 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN1P07384 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CAPN1P07384 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 AL109923.1-201ENST00000618799 583 ntBASIC20.07■□□□□ 0.8
CAPN1P07384 AC231657.2-201ENST00000624556 255 ntBASIC20.07■□□□□ 0.8
CAPN1P07384 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
CAPN1P07384 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CAPN1P07384 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN1P07384 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN1P07384 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPN1P07384 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPN1P07384 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPN1P07384 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPN1P07384 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPN1P07384 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CAPN1P07384 GABARAPL3-202ENST00000624044 1851 ntBASIC20.06■□□□□ 0.8
CAPN1P07384 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 AC007225.1-201ENST00000566331 1836 ntBASIC20.06■□□□□ 0.8
CAPN1P07384 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPN1P07384 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN1P07384 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPN1P07384 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN1P07384 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN1P07384 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CAPN1P07384 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN1P07384 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN1P07384 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN1P07384 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN1P07384 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms