Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC009299.2-201ENST00000482477 511 ntBASIC17.19■□□□□ 0.34
CD74P04233 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD74P04233 AC011298.3-201ENST00000615796 283 ntBASIC17.19■□□□□ 0.34
CD74P04233 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD74P04233 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CD74P04233 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD74P04233 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD74P04233 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD74P04233 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD74P04233 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CD74P04233 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CD74P04233 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.18■□□□□ 0.34
CD74P04233 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.18■□□□□ 0.34
CD74P04233 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.18■□□□□ 0.34
CD74P04233 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CD74P04233 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
CD74P04233 AC133561.4-201ENST00000566112 224 ntBASIC17.18■□□□□ 0.34
CD74P04233 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CD74P04233 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CD74P04233 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.18■□□□□ 0.34
CD74P04233 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.18■□□□□ 0.34
CD74P04233 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.18■□□□□ 0.34
CD74P04233 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.18■□□□□ 0.34
CD74P04233 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD74P04233 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.18■□□□□ 0.34
CD74P04233 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CD74P04233 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CD74P04233 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CD74P04233 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD74P04233 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.17■□□□□ 0.34
CD74P04233 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD74P04233 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD74P04233 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD74P04233 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD74P04233 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD74P04233 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.17■□□□□ 0.34
CD74P04233 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.17■□□□□ 0.34
CD74P04233 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.17■□□□□ 0.34
CD74P04233 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.17■□□□□ 0.34
CD74P04233 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD74P04233 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.17■□□□□ 0.34
CD74P04233 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.17■□□□□ 0.34
CD74P04233 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD74P04233 AP004607.4-201ENST00000530158 1459 ntBASIC17.17■□□□□ 0.34
CD74P04233 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.17■□□□□ 0.34
CD74P04233 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD74P04233 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CD74P04233 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD74P04233 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CD74P04233 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CD74P04233 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.16■□□□□ 0.34
CD74P04233 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD74P04233 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD74P04233 AC004408.2-201ENST00000623613 2777 ntBASIC17.16■□□□□ 0.34
CD74P04233 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.16■□□□□ 0.34
CD74P04233 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD74P04233 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD74P04233 DUX4L19-201ENST00000557448 1267 ntBASIC17.16■□□□□ 0.34
CD74P04233 TMEM179-206ENST00000616017 1645 ntBASIC17.16■□□□□ 0.34
CD74P04233 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD74P04233 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CD74P04233 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD74P04233 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CD74P04233 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD74P04233 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CD74P04233 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CD74P04233 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD74P04233 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD74P04233 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD74P04233 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD74P04233 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.15■□□□□ 0.34
CD74P04233 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD74P04233 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CD74P04233 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD74P04233 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CD74P04233 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CD74P04233 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.15■□□□□ 0.34
CD74P04233 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CD74P04233 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD74P04233 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD74P04233 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.15■□□□□ 0.34
CD74P04233 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CD74P04233 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD74P04233 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms