Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-ND1P03886 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND1P03886 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND1P03886 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.26■□□□□ 0.67
MT-ND1P03886 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
MT-ND1P03886 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.26■□□□□ 0.67
MT-ND1P03886 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND1P03886 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND1P03886 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND1P03886 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND1P03886 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND1P03886 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.26■□□□□ 0.67
MT-ND1P03886 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MT-ND1P03886 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MT-ND1P03886 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.25■□□□□ 0.67
MT-ND1P03886 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.25■□□□□ 0.67
MT-ND1P03886 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MT-ND1P03886 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.25■□□□□ 0.67
MT-ND1P03886 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.25■□□□□ 0.67
MT-ND1P03886 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.25■□□□□ 0.67
MT-ND1P03886 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
MT-ND1P03886 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MT-ND1P03886 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.25■□□□□ 0.67
MT-ND1P03886 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.25■□□□□ 0.67
MT-ND1P03886 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.25■□□□□ 0.67
MT-ND1P03886 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MT-ND1P03886 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.25■□□□□ 0.67
MT-ND1P03886 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND1P03886 SMG8-203ENST00000578922 2178 ntBASIC19.25■□□□□ 0.67
MT-ND1P03886 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.24■□□□□ 0.67
MT-ND1P03886 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MT-ND1P03886 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND1P03886 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MT-ND1P03886 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND1P03886 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-ND1P03886 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND1P03886 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MT-ND1P03886 AC096631.2-201ENST00000436136 790 ntBASIC19.24■□□□□ 0.67
MT-ND1P03886 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND1P03886 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND1P03886 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.24■□□□□ 0.67
MT-ND1P03886 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-ND1P03886 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.24■□□□□ 0.67
MT-ND1P03886 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MT-ND1P03886 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-ND1P03886 AC008764.7-201ENST00000593779 1081 ntBASIC19.24■□□□□ 0.67
MT-ND1P03886 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-ND1P03886 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.24■□□□□ 0.67
MT-ND1P03886 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND1P03886 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MT-ND1P03886 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND1P03886 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND1P03886 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND1P03886 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 TCF3P1-201ENST00000423021 1937 ntBASIC19.23■□□□□ 0.67
MT-ND1P03886 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MT-ND1P03886 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MT-ND1P03886 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.23■□□□□ 0.67
MT-ND1P03886 PBX2P1-201ENST00000493219 1291 ntBASIC19.23■□□□□ 0.67
MT-ND1P03886 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.23■□□□□ 0.67
MT-ND1P03886 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MT-ND1P03886 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MT-ND1P03886 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND1P03886 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
MT-ND1P03886 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND1P03886 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MT-ND1P03886 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.22■□□□□ 0.67
MT-ND1P03886 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND1P03886 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND1P03886 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND1P03886 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND1P03886 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.22■□□□□ 0.67
MT-ND1P03886 AC099791.1-201ENST00000416440 715 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms