Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.33■□□□□ 0.53
HLA-DQA2P01906 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.33■□□□□ 0.53
HLA-DQA2P01906 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQA2P01906 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQA2P01906 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQA2P01906 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQA2P01906 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQA2P01906 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HLA-DQA2P01906 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HLA-DQA2P01906 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 MIR638-201ENST00000385237 100 ntBASIC18.33■□□□□ 0.52
HLA-DQA2P01906 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DQA2P01906 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 AC245052.3-201ENST00000450182 901 ntBASIC18.32■□□□□ 0.52
HLA-DQA2P01906 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 AC138907.5-202ENST00000569484 235 ntBASIC18.32■□□□□ 0.52
HLA-DQA2P01906 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DQA2P01906 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 AC027702.1-201ENST00000563810 1770 ntBASIC18.31■□□□□ 0.52
HLA-DQA2P01906 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQA2P01906 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 KRT16P2-201ENST00000414673 1423 ntBASIC18.3■□□□□ 0.52
HLA-DQA2P01906 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQA2P01906 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 PCDHAC2-203ENST00000615316 3011 ntBASIC18.29■□□□□ 0.52
HLA-DQA2P01906 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 AL391422.3-201ENST00000603791 2761 ntBASIC18.29■□□□□ 0.52
HLA-DQA2P01906 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms