Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.36■□□□□ 0.53
PFDN1O60925 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN1O60925 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PFDN1O60925 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PFDN1O60925 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.36■□□□□ 0.53
PFDN1O60925 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
PFDN1O60925 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.35■□□□□ 0.53
PFDN1O60925 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.35■□□□□ 0.53
PFDN1O60925 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PFDN1O60925 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.35■□□□□ 0.53
PFDN1O60925 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PFDN1O60925 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.35■□□□□ 0.53
PFDN1O60925 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PFDN1O60925 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.35■□□□□ 0.53
PFDN1O60925 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.35■□□□□ 0.53
PFDN1O60925 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PFDN1O60925 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PFDN1O60925 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PFDN1O60925 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.35■□□□□ 0.53
PFDN1O60925 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PFDN1O60925 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.35■□□□□ 0.53
PFDN1O60925 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PFDN1O60925 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.34■□□□□ 0.53
PFDN1O60925 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN1O60925 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.34■□□□□ 0.53
PFDN1O60925 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN1O60925 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN1O60925 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN1O60925 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN1O60925 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.34■□□□□ 0.53
PFDN1O60925 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN1O60925 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.34■□□□□ 0.53
PFDN1O60925 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN1O60925 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.34■□□□□ 0.53
PFDN1O60925 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PFDN1O60925 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN1O60925 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN1O60925 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PFDN1O60925 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.34■□□□□ 0.53
PFDN1O60925 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PFDN1O60925 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PFDN1O60925 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PFDN1O60925 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PFDN1O60925 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.33■□□□□ 0.52
PFDN1O60925 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN1O60925 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN1O60925 AC097358.2-201ENST00000607541 1159 ntBASIC18.33■□□□□ 0.52
PFDN1O60925 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PFDN1O60925 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN1O60925 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN1O60925 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN1O60925 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PFDN1O60925 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.33■□□□□ 0.52
PFDN1O60925 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN1O60925 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN1O60925 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN1O60925 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.33■□□□□ 0.52
PFDN1O60925 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PFDN1O60925 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PFDN1O60925 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PFDN1O60925 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PFDN1O60925 AL162377.1-201ENST00000618844 1793 ntBASIC18.32■□□□□ 0.52
PFDN1O60925 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.32■□□□□ 0.52
PFDN1O60925 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.32■□□□□ 0.52
PFDN1O60925 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PFDN1O60925 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.32■□□□□ 0.52
PFDN1O60925 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.32■□□□□ 0.52
PFDN1O60925 TNRC18P3-201ENST00000441896 2691 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms