Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PRAMEF2O60811 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.2■□□□□ 0.66
PRAMEF2O60811 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.2■□□□□ 0.66
PRAMEF2O60811 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEF2O60811 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.2■□□□□ 0.66
PRAMEF2O60811 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.2■□□□□ 0.66
PRAMEF2O60811 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PRAMEF2O60811 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF2O60811 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PRAMEF2O60811 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF2O60811 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF2O60811 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF2O60811 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF2O60811 AC006128.1-201ENST00000624704 1661 ntBASIC19.18■□□□□ 0.66
PRAMEF2O60811 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.18■□□□□ 0.66
PRAMEF2O60811 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF2O60811 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.18■□□□□ 0.66
PRAMEF2O60811 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PRAMEF2O60811 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.18■□□□□ 0.66
PRAMEF2O60811 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.18■□□□□ 0.66
PRAMEF2O60811 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.18■□□□□ 0.66
PRAMEF2O60811 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.18■□□□□ 0.66
PRAMEF2O60811 AC092118.2-201ENST00000613495 667 ntBASIC19.18■□□□□ 0.66
PRAMEF2O60811 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.18■□□□□ 0.66
PRAMEF2O60811 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PRAMEF2O60811 PLK5-205ENST00000642079 1969 ntBASIC19.18■□□□□ 0.66
PRAMEF2O60811 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF2O60811 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF2O60811 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF2O60811 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF2O60811 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.18■□□□□ 0.66
PRAMEF2O60811 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.17■□□□□ 0.66
PRAMEF2O60811 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PRAMEF2O60811 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.17■□□□□ 0.66
PRAMEF2O60811 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRAMEF2O60811 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 BX276092.2-201ENST00000417668 665 ntBASIC19.17■□□□□ 0.66
PRAMEF2O60811 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEF2O60811 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.17■□□□□ 0.66
PRAMEF2O60811 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRAMEF2O60811 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEF2O60811 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF2O60811 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEF2O60811 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
PRAMEF2O60811 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF2O60811 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF2O60811 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PRAMEF2O60811 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.16■□□□□ 0.66
PRAMEF2O60811 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PRAMEF2O60811 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.16■□□□□ 0.66
PRAMEF2O60811 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEF2O60811 FAM201B-201ENST00000458407 597 ntBASIC19.16■□□□□ 0.66
PRAMEF2O60811 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PRAMEF2O60811 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.16■□□□□ 0.66
PRAMEF2O60811 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.16■□□□□ 0.66
PRAMEF2O60811 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms