Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.56■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AL049796.1-201ENST00000565336 1766 ntBASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AL024507.2-201ENST00000606070 2574 ntBASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 PRORSD1P-201ENST00000295112 541 ntBASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AC128676.1-201ENST00000454392 318 ntBASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 AC008687.6-201ENST00000596318 630 ntBASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
C1QTNF3-AMACRE9PGA6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 UNC93B4-201ENST00000505679 747 ntBASIC20.51■□□□□ 0.87
C1QTNF3-AMACRE9PGA6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms