Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 AL356740.2-201ENST00000601559 647 ntBASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 AC004408.2-201ENST00000623613 2777 ntBASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
TRDV1A0A1B0GX56 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRDV1A0A1B0GX56 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 AC136469.2-201ENST00000623944 1028 ntBASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.97■□□□□ 0.47
TRDV1A0A1B0GX56 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRDV1A0A1B0GX56 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRDV1A0A1B0GX56 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRDV1A0A1B0GX56 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
TRDV1A0A1B0GX56 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRDV1A0A1B0GX56 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRDV1A0A1B0GX56 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRDV1A0A1B0GX56 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRDV1A0A1B0GX56 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TRDV1A0A1B0GX56 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.95■□□□□ 0.46
TRDV1A0A1B0GX56 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRDV1A0A1B0GX56 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRDV1A0A1B0GX56 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRDV1A0A1B0GX56 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms