Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AC027612.3-201ENST00000413684 1047 ntBASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AC073314.1-201ENST00000568729 2216 ntBASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 GABARAPL3-202ENST00000624044 1851 ntBASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AP005212.1-201ENST00000581547 1997 ntBASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AC123595.1-201ENST00000440769 1046 ntBASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 LINC02228-203ENST00000641970 1355 ntBASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 YBX1P1-201ENST00000445822 960 ntBASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms