Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 KRT18P20-201ENST00000548986 1279 ntBASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 UBE2DNL-204ENST00000602536 740 ntBASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 AC019069.1-201ENST00000610008 1333 ntBASIC15.17■□□□□ 0.02
TRAV12-2A0A075B6T6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 MIR6821-201ENST00000617625 74 ntBASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 AL391422.3-201ENST00000603791 2761 ntBASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 PCDHAC2-203ENST00000615316 3011 ntBASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-2A0A075B6T6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 AC027702.1-201ENST00000563810 1770 ntBASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-2A0A075B6T6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 AC116050.2-201ENST00000612102 1779 ntBASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV12-2A0A075B6T6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 7.4 ms