Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 GSTA4-202ENST00000370960 859 ntTSL 3 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 AC245452.3-201ENST00000413294 162 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 RPL17P10-201ENST00000416091 555 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 FYTTD1P1-201ENST00000424250 921 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 OR5S1P-201ENST00000453063 951 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 LINC00445-202ENST00000456848 643 ntTSL 3 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 RN7SL280P-201ENST00000496490 288 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 GLYATL1P3-201ENST00000527482 909 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 NPM1P50-201ENST00000532878 867 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 AC009997.1-201ENST00000557862 129 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 GAPLINC-203ENST00000581029 613 ntTSL 3 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 AC119751.8-201ENST00000597032 156 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 AC026150.3-201ENST00000602595 499 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 uc_338.2-201ENST00000612963 182 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 AL731556.2-201ENST00000615610 770 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 MIR6829-201ENST00000620375 67 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 LINC01320-214ENST00000627935 916 ntTSL 5 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 SMG7-216ENST00000638826 219 ntTSL 2 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 GPHN-201ENST00000315266 4193 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 AC091962.1-201ENST00000561496 1765 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 KDM2B-206ENST00000538046 2301 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 CU634019.3-201ENST00000623962 2456 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 FP236315.2-201ENST00000624506 2456 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 FP671120.2-201ENST00000624806 2456 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 AC012640.4-201ENST00000606194 2550 ntBASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 ASH2L-202ENST00000428278 2678 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 FNBP1L-201ENST00000260506 5341 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SYCE2Q6PIF2 CMSS1-201ENST00000421999 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 LINC01539-201ENST00000587904 2068 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 PRSS54-202ENST00000543437 1555 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 COA7-201ENST00000371538 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 KRTAP9-6-201ENST00000391355 1303 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 RN7SKP168-201ENST00000410910 300 ntBASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 PGAM1P8-201ENST00000526979 453 ntBASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 RTN4IP1-204ENST00000539449 814 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 AC002375.1-201ENST00000551161 581 ntTSL 3 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 OR13Z2P-201ENST00000606338 555 ntBASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 AL109614.1-201ENST00000620327 419 ntBASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 RP1-206ENST00000636932 3649 ntTSL 5 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 NPAP1P4-201ENST00000443325 3310 ntBASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 MAB21L3-201ENST00000369500 3229 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 SLC19A3-201ENST00000258403 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 ZNF709-201ENST00000397732 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 ATAD1-201ENST00000308448 4640 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 SPATA31E1-201ENST00000325643 4478 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 ANKRD55-201ENST00000341048 2502 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 OR11A1-202ENST00000377148 2482 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 LILRB4-204ENST00000391736 4002 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 KLHL12-202ENST00000367259 2257 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 DMD-206ENST00000361471 2224 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 DKK2-201ENST00000285311 3638 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 WDR20-206ENST00000454394 2067 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYCE2Q6PIF2 AC023824.7-201ENST00000623041 5731 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 CAPN3-201ENST00000318023 3172 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 AL353625.1-201ENST00000569097 3131 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 LINC01858-201ENST00000564534 1838 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 AC100756.3-201ENST00000618455 1816 ntBASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 THBS3-203ENST00000457183 2727 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 CABYR-218ENST00000627314 1622 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 CHRNA6-201ENST00000276410 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCE2Q6PIF2 GLI1-207ENST00000543426 3394 ntTSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms