Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SLITRK3-202ENST00000475390 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
P04436 AC079316.2-201ENST00000623545 1375 ntBASIC8.22□□□□□ -1.09
P04436 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
P04436 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC8.22□□□□□ -1.09
P04436 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
P04436 TPP1-215ENST00000533371 3536 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
P04436 ATG4A-202ENST00000345734 2129 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
P04436 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC8.21□□□□□ -1.09
P04436 C14orf159-211ENST00000518868 3075 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.09
P04436 MAPK10-386ENST00000642038 2354 ntBASIC8.21□□□□□ -1.09
P04436 ZC4H2-203ENST00000447788 2649 ntTSL 2 BASIC8.21□□□□□ -1.09
P04436 OR3A1-201ENST00000323404 1650 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
P04436 AC092375.2-201ENST00000567370 1665 ntBASIC8.21□□□□□ -1.09
P04436 AC009021.2-201ENST00000567401 1666 ntBASIC8.21□□□□□ -1.09
P04436 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
P04436 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.09
P04436 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC8.21□□□□□ -1.09
P04436 VIT-208ENST00000497382 2650 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
P04436 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
P04436 MLF1-202ENST00000359117 2222 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
P04436 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
P04436 LINC01550-202ENST00000502187 2455 ntTSL 2 BASIC8.21□□□□□ -1.09
P04436 COL10A1-201ENST00000243222 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC8.21□□□□□ -1.1
P04436 SERAC1-205ENST00000607000 2284 ntTSL 2 BASIC8.21□□□□□ -1.1
P04436 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
P04436 TMED6-201ENST00000288025 938 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 OR10K1-201ENST00000289451 1073 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
P04436 CENPS-201ENST00000309048 896 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 KRTAP11-1-201ENST00000332378 912 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
P04436 MSR1-203ENST00000355282 1167 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 MIR296-201ENST00000385215 80 ntBASIC8.21□□□□□ -1.1
P04436 FANCL-204ENST00000403676 849 ntTSL 3 BASIC8.21□□□□□ -1.1
P04436 NIP7P3-201ENST00000404319 515 ntBASIC8.21□□□□□ -1.1
P04436 HCG24-202ENST00000414398 717 ntTSL 3 BASIC8.21□□□□□ -1.1
P04436 E2F4P1-201ENST00000422443 1133 ntBASIC8.21□□□□□ -1.1
P04436 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC8.21□□□□□ -1.1
P04436 C4orf51-201ENST00000438731 932 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
P04436 AL096855.1-201ENST00000449895 516 ntTSL 3 BASIC8.21□□□□□ -1.1
P04436 AC013472.1-202ENST00000455081 558 ntTSL 3 BASIC8.21□□□□□ -1.1
P04436 RN7SL401P-201ENST00000470065 298 ntBASIC8.21□□□□□ -1.1
P04436 AC027343.3-201ENST00000504494 564 ntTSL 4 BASIC8.21□□□□□ -1.1
P04436 AC027698.1-201ENST00000518536 625 ntTSL 3 BASIC8.21□□□□□ -1.1
P04436 AC138466.2-201ENST00000540993 304 ntBASIC8.21□□□□□ -1.1
P04436 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC8.21□□□□□ -1.1
P04436 PRSS58-201ENST00000547058 913 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 RN7SL474P-201ENST00000583485 301 ntBASIC8.21□□□□□ -1.1
P04436 EIF3H-212ENST00000611080 1265 ntTSL 5 BASIC8.21□□□□□ -1.1
P04436 AL080285.2-201ENST00000612765 458 ntBASIC8.21□□□□□ -1.1
P04436 AL591926.6-201ENST00000617375 415 ntBASIC8.21□□□□□ -1.1
P04436 RNF185-203ENST00000426256 3315 ntTSL 2 BASIC8.21□□□□□ -1.1
P04436 SEZ6L-205ENST00000403121 3078 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
P04436 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC8.21□□□□□ -1.1
P04436 DNM1L-211ENST00000547312 2393 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 CD300LD-201ENST00000375352 1303 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 NIPA2P4-201ENST00000523928 1341 ntBASIC8.21□□□□□ -1.1
P04436 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC8.21□□□□□ -1.1
P04436 CXorf21-201ENST00000378962 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 AC105342.1-201ENST00000378334 6848 ntBASIC8.21□□□□□ -1.1
P04436 ZNF366-201ENST00000318442 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
P04436 PSMC2-206ENST00000640277 1357 ntTSL 5 BASIC8.21□□□□□ -1.1
P04436 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
P04436 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
P04436 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
P04436 ELAVL4-201ENST00000357083 1442 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 EYA1-204ENST00000388741 3404 ntTSL 5 BASIC8.2□□□□□ -1.1
P04436 AC118282.4-201ENST00000623090 1712 ntBASIC8.2□□□□□ -1.1
P04436 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC8.2□□□□□ -1.1
P04436 TRPM3-207ENST00000377101 2075 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC8.2□□□□□ -1.1
P04436 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 ANKRD55-203ENST00000504958 2139 ntTSL 5 BASIC8.2□□□□□ -1.1
P04436 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
P04436 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 ZNF10-203ENST00000426665 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 AGXT2-204ENST00000510428 1561 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC8.2□□□□□ -1.1
P04436 SUN5-203ENST00000375523 1153 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
P04436 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC8.2□□□□□ -1.1
P04436 HCG18-234ENST00000413358 916 ntTSL 3 BASIC8.2□□□□□ -1.1
P04436 LINC02262-201ENST00000416680 735 ntTSL 3 BASIC8.2□□□□□ -1.1
P04436 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC8.2□□□□□ -1.1
P04436 RPS29P3-201ENST00000439929 171 ntBASIC8.2□□□□□ -1.1
P04436 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC8.2□□□□□ -1.1
P04436 RPS8P10-201ENST00000460876 622 ntBASIC8.2□□□□□ -1.1
P04436 AC108114.1-201ENST00000477321 437 ntBASIC8.2□□□□□ -1.1
P04436 RN7SL580P-201ENST00000492489 287 ntBASIC8.2□□□□□ -1.1
P04436 OR7E121P-201ENST00000494533 1022 ntBASIC8.2□□□□□ -1.1
P04436 ASS1P8-201ENST00000504437 647 ntBASIC8.2□□□□□ -1.1
P04436 OR7E28P-201ENST00000505191 975 ntBASIC8.2□□□□□ -1.1
P04436 NREP-219ENST00000509979 771 ntTSL 4 BASIC8.2□□□□□ -1.1
P04436 RPL10P19-203ENST00000522289 663 ntTSL 3 BASIC8.2□□□□□ -1.1
P04436 AL049873.2-201ENST00000555790 498 ntBASIC8.2□□□□□ -1.1
P04436 AC090164.1-201ENST00000560214 664 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms