RNA–Protein interactions for RNA: ENST00000288025.3

TMED6-201, Transcript of transmembrane p24 trafficking protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED6, Length 938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED6-201ENST00000288025 AEBP2Q6ZN18 517 aaPredicted RBP28.67■■■□□ 2.18
TMED6-201ENST00000288025 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
TMED6-201ENST00000288025 SENP3Q9H4L4 574 aaPredicted RBP24.57■■□□□ 1.52
TMED6-201ENST00000288025 PHF23Q9BUL5 403 aaPredicted RBP24.19■■□□□ 1.46
TMED6-201ENST00000288025 FOXD1Q16676 465 aa22.88■■□□□ 1.25
TMED6-201ENST00000288025 NISCHQ9Y2I1 1504 aa21.92■■□□□ 1.1
TMED6-201ENST00000288025 MSH5O43196 834 aa21.56■■□□□ 1.04
TMED6-201ENST00000288025 PLPPR3Q6T4P5 718 aa21.53■■□□□ 1.04
TMED6-201ENST00000288025 POTEDQ86YR6 584 aa21.38■■□□□ 1.01
TMED6-201ENST00000288025 PIAS4Q8N2W9 510 aaPredicted RBP21.33■■□□□ 1.01
TMED6-201ENST00000288025 PPP6R1Q9UPN7 881 aa21.19■□□□□ 0.98
TMED6-201ENST00000288025 ADRA2BP18089 450 aa21.11■□□□□ 0.97
TMED6-201ENST00000288025 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
TMED6-201ENST00000288025 ABCC9O60706 1549 aa19.71■□□□□ 0.75
TMED6-201ENST00000288025 MAPK8IP2Q13387 824 aaPredicted RBP19.46■□□□□ 0.71
TMED6-201ENST00000288025 DMRT2Q9Y5R5 561 aa19.43■□□□□ 0.7
TMED6-201ENST00000288025 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
TMED6-201ENST00000288025 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
TMED6-201ENST00000288025 PPP4R3CPQ6ZMV5 832 aa18.83■□□□□ 0.6
TMED6-201ENST00000288025 NACADO15069 1562 aa18.68■□□□□ 0.58
TMED6-201ENST00000288025 HOXD11P31277 338 aaPredicted RBP18.64■□□□□ 0.57
TMED6-201ENST00000288025 DCAF8L1A6NGE4 600 aa18.62■□□□□ 0.57
TMED6-201ENST00000288025 CACNB1Q02641 598 aaPredicted RBP18.62■□□□□ 0.57
TMED6-201ENST00000288025 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
TMED6-201ENST00000288025 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
TMED6-201ENST00000288025 UNC13AQ9UPW8 1703 aa18.45■□□□□ 0.54
TMED6-201ENST00000288025 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
TMED6-201ENST00000288025 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
TMED6-201ENST00000288025 RNF39Q9H2S5 420 aa18.34■□□□□ 0.53
TMED6-201ENST00000288025 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
TMED6-201ENST00000288025 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
TMED6-201ENST00000288025 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
TMED6-201ENST00000288025 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
TMED6-201ENST00000288025 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
TMED6-201ENST00000288025 C1QBPQ07021 282 aaKnown RBP18.1■□□□□ 0.49
TMED6-201ENST00000288025 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
TMED6-201ENST00000288025 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
TMED6-201ENST00000288025 SCRIBQ14160 1630 aa18.04■□□□□ 0.48
TMED6-201ENST00000288025 CC2D2AQ9P2K1 1620 aa17.84■□□□□ 0.45
TMED6-201ENST00000288025 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
TMED6-201ENST00000288025 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
TMED6-201ENST00000288025 NPM3O75607 178 aaKnown RBP17.75■□□□□ 0.43
TMED6-201ENST00000288025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.43
TMED6-201ENST00000288025 KCNA4P22459 653 aa17.42■□□□□ 0.38
TMED6-201ENST00000288025 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
TMED6-201ENST00000288025 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
TMED6-201ENST00000288025 SMARCA2P51531 1590 aa17.17■□□□□ 0.34
TMED6-201ENST00000288025 CAPN15O75808 1086 aa17.14■□□□□ 0.33
TMED6-201ENST00000288025 NCAPD3P42695 1498 aa17.13■□□□□ 0.33
TMED6-201ENST00000288025 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
TMED6-201ENST00000288025 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
TMED6-201ENST00000288025 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
TMED6-201ENST00000288025 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
TMED6-201ENST00000288025 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
TMED6-201ENST00000288025 DSG3P32926 999 aa17.09■□□□□ 0.33
TMED6-201ENST00000288025 CUX2O14529 1486 aa17.04■□□□□ 0.32
TMED6-201ENST00000288025 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
TMED6-201ENST00000288025 SLC4A2P04920 1241 aa17.01■□□□□ 0.31
TMED6-201ENST00000288025 PEG3Q9GZU2 1588 aa16.96■□□□□ 0.31
TMED6-201ENST00000288025 APLP2Q06481 763 aa16.92■□□□□ 0.3
TMED6-201ENST00000288025 NESP48681 1621 aa16.89■□□□□ 0.29
TMED6-201ENST00000288025 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.29
TMED6-201ENST00000288025 DNAJC5Q9H3Z4 198 aa16.88■□□□□ 0.29
TMED6-201ENST00000288025 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
TMED6-201ENST00000288025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
TMED6-201ENST00000288025 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
TMED6-201ENST00000288025 KIF21AQ7Z4S6 1674 aa16.82■□□□□ 0.28
TMED6-201ENST00000288025 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
TMED6-201ENST00000288025 ZNF219Q9P2Y4 722 aaPredicted RBP16.8■□□□□ 0.28
TMED6-201ENST00000288025 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
TMED6-201ENST00000288025 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
TMED6-201ENST00000288025 WIZO95785 1651 aa16.75■□□□□ 0.27
TMED6-201ENST00000288025 POTEHQ6S545 545 aa16.73■□□□□ 0.27
TMED6-201ENST00000288025 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
TMED6-201ENST00000288025 ABCB7O75027 752 aa16.68■□□□□ 0.26
TMED6-201ENST00000288025 CADPSQ9ULU8 1353 aa16.63■□□□□ 0.25
TMED6-201ENST00000288025 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
TMED6-201ENST00000288025 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
TMED6-201ENST00000288025 WDR62O43379 1518 aa16.56■□□□□ 0.24
TMED6-201ENST00000288025 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
TMED6-201ENST00000288025 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
TMED6-201ENST00000288025 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
TMED6-201ENST00000288025 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
TMED6-201ENST00000288025 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
TMED6-201ENST00000288025 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
TMED6-201ENST00000288025 CFTRP13569 1480 aa16.44■□□□□ 0.22
TMED6-201ENST00000288025 RBM42Q9BTD8 480 aaKnown RBP16.37■□□□□ 0.21
TMED6-201ENST00000288025 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.2
TMED6-201ENST00000288025 POLA2Q14181 598 aa16.3■□□□□ 0.2
TMED6-201ENST00000288025 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
TMED6-201ENST00000288025 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
TMED6-201ENST00000288025 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
TMED6-201ENST00000288025 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
TMED6-201ENST00000288025 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
TMED6-201ENST00000288025 TOPBP1Q92547 1522 aa16.18■□□□□ 0.18
TMED6-201ENST00000288025 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
TMED6-201ENST00000288025 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
TMED6-201ENST00000288025 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
TMED6-201ENST00000288025 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
TMED6-201ENST00000288025 CHD1O14646 1710 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms