Protein–RNA interactions for Protein: C9J4A7

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9J4A7 ITFG2-AS1-202ENST00000636122 962 ntTSL 5 BASIC8.56□□□□□ -1.04
C9J4A7 LINC00032-201ENST00000638495 1040 ntBASIC8.56□□□□□ -1.04
C9J4A7 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
C9J4A7 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
C9J4A7 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
C9J4A7 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
C9J4A7 AC090525.2-201ENST00000551685 2270 ntBASIC8.56□□□□□ -1.04
C9J4A7 ZNF615-214ENST00000618049 2284 ntTSL 5 BASIC8.56□□□□□ -1.04
C9J4A7 NTNG2-201ENST00000372179 3984 ntTSL 5 BASIC8.56□□□□□ -1.04
C9J4A7 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC8.56□□□□□ -1.04
C9J4A7 DNM1P46-201ENST00000341853 3831 ntTSL 2 BASIC8.56□□□□□ -1.04
C9J4A7 AL135903.1-201ENST00000402742 1590 ntBASIC8.56□□□□□ -1.04
C9J4A7 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
C9J4A7 CU634019.3-201ENST00000623962 2456 ntBASIC8.56□□□□□ -1.04
C9J4A7 FP236315.2-201ENST00000624506 2456 ntBASIC8.56□□□□□ -1.04
C9J4A7 FP671120.2-201ENST00000624806 2456 ntBASIC8.56□□□□□ -1.04
C9J4A7 NR4A2-201ENST00000339562 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
C9J4A7 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
C9J4A7 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
C9J4A7 AC244034.3-201ENST00000624347 3135 ntBASIC8.56□□□□□ -1.04
C9J4A7 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
C9J4A7 SPATA7-202ENST00000356583 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC8.55□□□□□ -1.04
C9J4A7 GTF2IP1-205ENST00000618412 2990 ntTSL 2 BASIC8.55□□□□□ -1.04
C9J4A7 R3HDM2-207ENST00000441731 4076 ntTSL 5 BASIC8.55□□□□□ -1.04
C9J4A7 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
C9J4A7 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC8.55□□□□□ -1.04
C9J4A7 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 AC073539.1-201ENST00000599810 2094 ntBASIC8.55□□□□□ -1.04
C9J4A7 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
C9J4A7 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC8.55□□□□□ -1.04
C9J4A7 CSF1R-201ENST00000286301 3989 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 SOX5-215ENST00000545921 2589 ntAPPRIS ALT1 TSL 2 BASIC8.55□□□□□ -1.04
C9J4A7 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 OR10K1-201ENST00000289451 1073 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
C9J4A7 RIMKLBP1-201ENST00000408914 1164 ntBASIC8.55□□□□□ -1.04
C9J4A7 SET-205ENST00000409104 962 ntTSL 5 BASIC8.55□□□□□ -1.04
C9J4A7 RPSAP63-201ENST00000412013 888 ntBASIC8.55□□□□□ -1.04
C9J4A7 TPM3P4-201ENST00000425942 755 ntBASIC8.55□□□□□ -1.04
C9J4A7 AC009501.2-201ENST00000428700 312 ntBASIC8.55□□□□□ -1.04
C9J4A7 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC8.55□□□□□ -1.04
C9J4A7 AC099568.1-201ENST00000432395 509 ntTSL 3 BASIC8.55□□□□□ -1.04
C9J4A7 AC096732.1-201ENST00000439565 477 ntTSL 3 BASIC8.55□□□□□ -1.04
C9J4A7 AC002064.1-201ENST00000445784 733 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 ZNF90P3-201ENST00000450345 1192 ntBASIC8.55□□□□□ -1.04
C9J4A7 AL450023.2-201ENST00000453276 545 ntBASIC8.55□□□□□ -1.04
C9J4A7 AC004947.1-202ENST00000457000 576 ntTSL 4 BASIC8.55□□□□□ -1.04
C9J4A7 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC8.55□□□□□ -1.04
C9J4A7 RN7SL401P-201ENST00000470065 298 ntBASIC8.55□□□□□ -1.04
C9J4A7 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 IGLV3-29-201ENST00000520084 244 ntBASIC8.55□□□□□ -1.04
C9J4A7 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.55□□□□□ -1.04
C9J4A7 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
C9J4A7 PRSS58-201ENST00000547058 913 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC8.55□□□□□ -1.04
C9J4A7 RN7SL670P-201ENST00000577235 294 ntBASIC8.55□□□□□ -1.04
C9J4A7 AC103949.1-201ENST00000582064 457 ntTSL 3 BASIC8.55□□□□□ -1.04
C9J4A7 HDAC1P2-202ENST00000602936 807 ntBASIC8.55□□□□□ -1.04
C9J4A7 AC025518.2-201ENST00000605229 492 ntBASIC8.55□□□□□ -1.04
C9J4A7 AL132821.1-201ENST00000616029 394 ntBASIC8.55□□□□□ -1.04
C9J4A7 AC067904.3-201ENST00000617126 261 ntBASIC8.55□□□□□ -1.04
C9J4A7 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC8.55□□□□□ -1.04
C9J4A7 BDKRB2-203ENST00000554311 4040 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC8.55□□□□□ -1.04
C9J4A7 AC010643.1-201ENST00000599433 3263 ntTSL 2 BASIC8.55□□□□□ -1.04
C9J4A7 ICK-201ENST00000350082 6116 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 TFDP3-201ENST00000310125 1680 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
C9J4A7 AP004782.1-201ENST00000623990 3433 ntBASIC8.55□□□□□ -1.04
C9J4A7 LINC00461-212ENST00000511014 3539 ntTSL 2 BASIC8.55□□□□□ -1.04
C9J4A7 BAAT-202ENST00000395051 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC8.55□□□□□ -1.04
C9J4A7 NRXN3-202ENST00000335750 2764 ntTSL 5 BASIC8.55□□□□□ -1.04
C9J4A7 EIF1AD-201ENST00000312234 2887 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 RBFOX1-201ENST00000311745 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
C9J4A7 BEST3-203ENST00000331471 1506 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
C9J4A7 CHRNA6-201ENST00000276410 2400 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
C9J4A7 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC8.54□□□□□ -1.04
C9J4A7 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
C9J4A7 AL353625.1-201ENST00000569097 3131 ntBASIC8.54□□□□□ -1.04
C9J4A7 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
C9J4A7 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
C9J4A7 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.54□□□□□ -1.04
C9J4A7 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
C9J4A7 ZFYVE1-201ENST00000318876 4362 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
C9J4A7 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC8.54□□□□□ -1.04
C9J4A7 MEFV-202ENST00000339854 2959 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
C9J4A7 PLEK-201ENST00000234313 2869 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
C9J4A7 TCF4-240ENST00000568673 2398 ntTSL 5 BASIC8.54□□□□□ -1.04
C9J4A7 AL132796.2-201ENST00000554025 1851 ntTSL 5 BASIC8.54□□□□□ -1.04
C9J4A7 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC8.54□□□□□ -1.04
C9J4A7 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
C9J4A7 OR4L1-201ENST00000315683 939 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
C9J4A7 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
C9J4A7 ZDHHC11B-201ENST00000382776 1116 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
C9J4A7 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
C9J4A7 PAICSP3-201ENST00000428007 1168 ntBASIC8.54□□□□□ -1.04
C9J4A7 AC009495.1-201ENST00000428888 372 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms