RNA–Protein interactions for RNA: ENST00000318876.9

ZFYVE1-201, Transcript of zinc finger FYVE-type containing 1, humanhuman

TSL 1 (best) BASIC

Gene ZFYVE1, Length 4,362 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-201ENST00000318876 NISCHQ9Y2I1 1504 aa18.31■□□□□ 0.52
ZFYVE1-201ENST00000318876 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
ZFYVE1-201ENST00000318876 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
ZFYVE1-201ENST00000318876 ABCC9O60706 1549 aa16.04■□□□□ 0.16
ZFYVE1-201ENST00000318876 SUPT5HO00267 1087 aaKnown RBP15.8■□□□□ 0.12
ZFYVE1-201ENST00000318876 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
ZFYVE1-201ENST00000318876 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
ZFYVE1-201ENST00000318876 PCGF6Q9BYE7 350 aa15.43■□□□□ 0.06
ZFYVE1-201ENST00000318876 HRCP23327 699 aa15.29■□□□□ 0.04
ZFYVE1-201ENST00000318876 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
ZFYVE1-201ENST00000318876 SCRIBQ14160 1630 aa15.08■□□□□ 0.01
ZFYVE1-201ENST00000318876 PPARGC1BQ86YN6 1023 aaKnown RBP15.06■□□□□ 0
ZFYVE1-201ENST00000318876 PELP1Q8IZL8 1130 aaKnown RBP15.01□□□□□ -0.01
ZFYVE1-201ENST00000318876 RB1CC1Q8TDY2 1594 aa15□□□□□ -0.01
ZFYVE1-201ENST00000318876 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
ZFYVE1-201ENST00000318876 CHIC1Q5VXU3 224 aa14.92□□□□□ -0.02
ZFYVE1-201ENST00000318876 NACADO15069 1562 aa14.89□□□□□ -0.03
ZFYVE1-201ENST00000318876 ZEB1P37275 1124 aaPredicted RBP14.83□□□□□ -0.04
ZFYVE1-201ENST00000318876 MYT1Q01538 1121 aa14.79□□□□□ -0.04
ZFYVE1-201ENST00000318876 TRIM26Q12899 539 aaPredicted RBP14.78□□□□□ -0.04
ZFYVE1-201ENST00000318876 LOC105371045A0A1W2PR82 267 aa14.77□□□□□ -0.04
ZFYVE1-201ENST00000318876 FAM9AQ8IZU1 332 aaPredicted RBP14.75□□□□□ -0.05
ZFYVE1-201ENST00000318876 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
ZFYVE1-201ENST00000318876 CENPBP07199 599 aaPredicted RBP14.6□□□□□ -0.07
ZFYVE1-201ENST00000318876 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
ZFYVE1-201ENST00000318876 CCER1Q8TC90 406 aaPredicted RBP14.55□□□□□ -0.08
ZFYVE1-201ENST00000318876 RANGAP1P46060 587 aaPredicted RBP14.51□□□□□ -0.09
ZFYVE1-201ENST00000318876 TTBK1Q5TCY1 1321 aaPredicted RBP14.5□□□□□ -0.09
ZFYVE1-201ENST00000318876 CECR2Q9BXF3 1484 aa14.49□□□□□ -0.09
ZFYVE1-201ENST00000318876 MYO15BQ96JP2 1530 aa14.45□□□□□ -0.1
ZFYVE1-201ENST00000318876 YTHDC1Q96MU7 727 aaKnown RBP14.37□□□□□ -0.11
ZFYVE1-201ENST00000318876 RSF1Q96T23 1441 aaPredicted RBP14.34□□□□□ -0.11
ZFYVE1-201ENST00000318876 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
ZFYVE1-201ENST00000318876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
ZFYVE1-201ENST00000318876 GTF3C3Q9Y5Q9 886 aa14.27□□□□□ -0.12
ZFYVE1-201ENST00000318876 BAZ1BQ9UIG0 1483 aaKnown RBP14.27□□□□□ -0.13
ZFYVE1-201ENST00000318876 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
ZFYVE1-201ENST00000318876 DIEXFQ68CQ4 756 aaKnown RBP14.25□□□□□ -0.13
ZFYVE1-201ENST00000318876 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
ZFYVE1-201ENST00000318876 BAZ1AQ9NRL2 1556 aaPredicted RBP14.24□□□□□ -0.13
ZFYVE1-201ENST00000318876 ACIN1Q9UKV3 1341 aaKnown RBP14.23□□□□□ -0.13
ZFYVE1-201ENST00000318876 ATP1B4Q9UN42 357 aaPredicted RBP14.19□□□□□ -0.14
ZFYVE1-201ENST00000318876 FBLN2P98095 1184 aa14.16□□□□□ -0.14
ZFYVE1-201ENST00000318876 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
ZFYVE1-201ENST00000318876 APLP2Q06481 763 aa14.13□□□□□ -0.15
ZFYVE1-201ENST00000318876 NEUROD1Q13562 356 aa14.11□□□□□ -0.15
ZFYVE1-201ENST00000318876 BICRAQ9NZM4 1560 aa14.07□□□□□ -0.16
ZFYVE1-201ENST00000318876 WIZO95785 1651 aa14.06□□□□□ -0.16
ZFYVE1-201ENST00000318876 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
ZFYVE1-201ENST00000318876 EIF4G1Q04637 1599 aaKnown RBP14.04□□□□□ -0.16
ZFYVE1-201ENST00000318876 ERCC6Q03468 1493 aa14.02□□□□□ -0.16
ZFYVE1-201ENST00000318876 SMARCA4P51532 1647 aa14.02□□□□□ -0.16
ZFYVE1-201ENST00000318876 SMARCA2P51531 1590 aa14.02□□□□□ -0.17
ZFYVE1-201ENST00000318876 UNC13AQ9UPW8 1703 aa13.96□□□□□ -0.18
ZFYVE1-201ENST00000318876 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
ZFYVE1-201ENST00000318876 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
ZFYVE1-201ENST00000318876 CC2D2AQ9P2K1 1620 aa13.92□□□□□ -0.18
ZFYVE1-201ENST00000318876 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
ZFYVE1-201ENST00000318876 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
ZFYVE1-201ENST00000318876 P3H3Q8IVL6 736 aa13.84□□□□□ -0.19
ZFYVE1-201ENST00000318876 CADPSQ9ULU8 1353 aa13.83□□□□□ -0.2
ZFYVE1-201ENST00000318876 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
ZFYVE1-201ENST00000318876 NCAPD3P42695 1498 aa13.81□□□□□ -0.2
ZFYVE1-201ENST00000318876 WRNQ14191 1432 aaPredicted RBP eCLIP13.8□□□□□ -0.2
ZFYVE1-201ENST00000318876 ARID3CA6NKF2 412 aa13.8□□□□□ -0.2
ZFYVE1-201ENST00000318876 ERICH6Q7L0X2 663 aa13.79□□□□□ -0.2
ZFYVE1-201ENST00000318876 PDS5BQ9NTI5 1447 aa13.79□□□□□ -0.2
ZFYVE1-201ENST00000318876 NEFLP07196 543 aa13.79□□□□□ -0.2
ZFYVE1-201ENST00000318876 CHMP7Q8WUX9 453 aaPredicted RBP13.76□□□□□ -0.21
ZFYVE1-201ENST00000318876 NESP48681 1621 aa13.75□□□□□ -0.21
ZFYVE1-201ENST00000318876 ABCC8Q09428 1581 aa13.73□□□□□ -0.21
ZFYVE1-201ENST00000318876 MIER1Q8N108 512 aa13.7□□□□□ -0.22
ZFYVE1-201ENST00000318876 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
ZFYVE1-201ENST00000318876 TDRD9Q8NDG6 1382 aaKnown RBP13.67□□□□□ -0.22
ZFYVE1-201ENST00000318876 BCANQ96GW7 911 aa13.67□□□□□ -0.22
ZFYVE1-201ENST00000318876 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
ZFYVE1-201ENST00000318876 ITGAEP38570 1179 aa13.63□□□□□ -0.23
ZFYVE1-201ENST00000318876 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
ZFYVE1-201ENST00000318876 CUX2O14529 1486 aa13.61□□□□□ -0.23
ZFYVE1-201ENST00000318876 SOGA1O94964 1423 aa13.6□□□□□ -0.23
ZFYVE1-201ENST00000318876 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
ZFYVE1-201ENST00000318876 KIF27Q86VH2 1401 aa13.56□□□□□ -0.24
ZFYVE1-201ENST00000318876 CLSPNQ9HAW4 1339 aa13.51□□□□□ -0.25
ZFYVE1-201ENST00000318876 CFTRP13569 1480 aa13.5□□□□□ -0.25
ZFYVE1-201ENST00000318876 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
ZFYVE1-201ENST00000318876 CARMIL1Q5VZK9 1371 aa13.45□□□□□ -0.26
ZFYVE1-201ENST00000318876 FGD5Q6ZNL6 1462 aa13.44□□□□□ -0.26
ZFYVE1-201ENST00000318876 NPM1P06748 294 aaKnown RBP eCLIP13.43□□□□□ -0.26
ZFYVE1-201ENST00000318876 FKBP8Q14318 412 aa13.43□□□□□ -0.26
ZFYVE1-201ENST00000318876 FAM50AQ14320 339 aaKnown RBP13.42□□□□□ -0.26
ZFYVE1-201ENST00000318876 ANP32EQ9BTT0 268 aa13.41□□□□□ -0.26
ZFYVE1-201ENST00000318876 AQRO60306 1485 aaKnown RBP eCLIP13.41□□□□□ -0.26
ZFYVE1-201ENST00000318876 PEG3Q9GZU2 1588 aa13.4□□□□□ -0.26
ZFYVE1-201ENST00000318876 CEP162Q5TB80 1403 aa13.4□□□□□ -0.26
ZFYVE1-201ENST00000318876 SUPT16HQ9Y5B9 1047 aaKnown RBP13.39□□□□□ -0.27
ZFYVE1-201ENST00000318876 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
ZFYVE1-201ENST00000318876 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
ZFYVE1-201ENST00000318876 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
ZFYVE1-201ENST00000318876 EEA1Q15075 1411 aa13.36□□□□□ -0.27
ZFYVE1-201ENST00000318876 KCNH8Q96L42 1107 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms