RNA–Protein interactions for RNA: ENST00000339854.8

MEFV-202, Transcript of MEFV, pyrin innate immunity regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEFV, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEFV-202ENST00000339854 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
MEFV-202ENST00000339854 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
MEFV-202ENST00000339854 SHROOM4Q9ULL8 1493 aa17.44■□□□□ 0.38
MEFV-202ENST00000339854 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
MEFV-202ENST00000339854 DCAF8L2P0C7V8 631 aa16.99■□□□□ 0.31
MEFV-202ENST00000339854 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
MEFV-202ENST00000339854 CHIC1Q5VXU3 224 aa16.56■□□□□ 0.24
MEFV-202ENST00000339854 MYO15BQ96JP2 1530 aa16.51■□□□□ 0.23
MEFV-202ENST00000339854 DCAF1Q9Y4B6 1507 aa16.49■□□□□ 0.23
MEFV-202ENST00000339854 PCGF6Q9BYE7 350 aa16.2■□□□□ 0.18
MEFV-202ENST00000339854 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
MEFV-202ENST00000339854 NACADO15069 1562 aa16.14■□□□□ 0.17
MEFV-202ENST00000339854 HRCP23327 699 aa16.12■□□□□ 0.17
MEFV-202ENST00000339854 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
MEFV-202ENST00000339854 ABCC9O60706 1549 aa16.02■□□□□ 0.16
MEFV-202ENST00000339854 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
MEFV-202ENST00000339854 RB1CC1Q8TDY2 1594 aa15.95■□□□□ 0.14
MEFV-202ENST00000339854 PPARGC1BQ86YN6 1023 aaKnown RBP15.92■□□□□ 0.14
MEFV-202ENST00000339854 TRIM41Q8WV44 630 aa15.89■□□□□ 0.13
MEFV-202ENST00000339854 FAM9AQ8IZU1 332 aaPredicted RBP15.88■□□□□ 0.13
MEFV-202ENST00000339854 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
MEFV-202ENST00000339854 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
MEFV-202ENST00000339854 TRIM26Q12899 539 aaPredicted RBP15.78■□□□□ 0.12
MEFV-202ENST00000339854 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
MEFV-202ENST00000339854 UNC13AQ9UPW8 1703 aa15.66■□□□□ 0.1
MEFV-202ENST00000339854 WIZO95785 1651 aa15.62■□□□□ 0.09
MEFV-202ENST00000339854 BICRAQ9NZM4 1560 aa15.44■□□□□ 0.06
MEFV-202ENST00000339854 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
MEFV-202ENST00000339854 ZEB1P37275 1124 aaPredicted RBP15.39■□□□□ 0.05
MEFV-202ENST00000339854 ABCC8Q09428 1581 aa15.33■□□□□ 0.04
MEFV-202ENST00000339854 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
MEFV-202ENST00000339854 TTBK1Q5TCY1 1321 aaPredicted RBP15.32■□□□□ 0.04
MEFV-202ENST00000339854 CCDC88BA6NC98 1476 aa15.31■□□□□ 0.04
MEFV-202ENST00000339854 EIF4G1Q04637 1599 aaKnown RBP15.3■□□□□ 0.04
MEFV-202ENST00000339854 SMARCA4P51532 1647 aa15.3■□□□□ 0.04
MEFV-202ENST00000339854 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
MEFV-202ENST00000339854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.24■□□□□ 0.03
MEFV-202ENST00000339854 SMARCA2P51531 1590 aa15.23■□□□□ 0.03
MEFV-202ENST00000339854 SOGA1O94964 1423 aa15.21■□□□□ 0.03
MEFV-202ENST00000339854 CCER1Q8TC90 406 aaPredicted RBP15.18■□□□□ 0.02
MEFV-202ENST00000339854 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
MEFV-202ENST00000339854 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
MEFV-202ENST00000339854 RUSC2Q8N2Y8 1516 aa15.14■□□□□ 0.01
MEFV-202ENST00000339854 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
MEFV-202ENST00000339854 CEP162Q5TB80 1403 aa15.12■□□□□ 0.01
MEFV-202ENST00000339854 TNIKQ9UKE5 1360 aa15.05■□□□□ 0
MEFV-202ENST00000339854 WRNQ14191 1432 aaPredicted RBP eCLIP15.02■□□□□ -0
MEFV-202ENST00000339854 EEA1Q15075 1411 aa14.99□□□□□ -0.01
MEFV-202ENST00000339854 RANGAP1P46060 587 aaPredicted RBP14.98□□□□□ -0.01
MEFV-202ENST00000339854 GOLGA3Q08378 1498 aa14.96□□□□□ -0.01
MEFV-202ENST00000339854 SCAF1Q9H7N4 1312 aaKnown RBP14.93□□□□□ -0.02
MEFV-202ENST00000339854 SYNJ1O43426 1573 aa14.93□□□□□ -0.02
MEFV-202ENST00000339854 ATAD2BQ9ULI0 1458 aa14.93□□□□□ -0.02
MEFV-202ENST00000339854 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
MEFV-202ENST00000339854 HNRNPUL2Q1KMD3 747 aaKnown RBP14.89□□□□□ -0.03
MEFV-202ENST00000339854 HMGXB3Q12766 1538 aa14.89□□□□□ -0.03
MEFV-202ENST00000339854 DIEXFQ68CQ4 756 aaKnown RBP14.88□□□□□ -0.03
MEFV-202ENST00000339854 CEP164Q9UPV0 1460 aa14.86□□□□□ -0.03
MEFV-202ENST00000339854 CLIP1P30622 1438 aa14.84□□□□□ -0.03
MEFV-202ENST00000339854 APLP2Q06481 763 aa14.81□□□□□ -0.04
MEFV-202ENST00000339854 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
MEFV-202ENST00000339854 KIF21BO75037 1637 aa14.78□□□□□ -0.04
MEFV-202ENST00000339854 NCAPD3P42695 1498 aa14.77□□□□□ -0.04
MEFV-202ENST00000339854 NEUROD1Q13562 356 aa14.77□□□□□ -0.04
MEFV-202ENST00000339854 ACIN1Q9UKV3 1341 aaKnown RBP14.75□□□□□ -0.05
MEFV-202ENST00000339854 VPS8Q8N3P4 1428 aa14.74□□□□□ -0.05
MEFV-202ENST00000339854 ZNF316A6NFI3 1004 aaPredicted RBP14.72□□□□□ -0.05
MEFV-202ENST00000339854 TOP2BQ02880 1626 aa14.68□□□□□ -0.06
MEFV-202ENST00000339854 CC2D2AQ9P2K1 1620 aa14.67□□□□□ -0.06
MEFV-202ENST00000339854 CENPBP07199 599 aaPredicted RBP14.66□□□□□ -0.06
MEFV-202ENST00000339854 YTHDC1Q96MU7 727 aaKnown RBP14.64□□□□□ -0.07
MEFV-202ENST00000339854 GTF3C3Q9Y5Q9 886 aa14.64□□□□□ -0.07
MEFV-202ENST00000339854 PRDM2Q13029 1718 aa14.62□□□□□ -0.07
MEFV-202ENST00000339854 KANK4Q5T7N3 995 aaPredicted RBP14.6□□□□□ -0.07
MEFV-202ENST00000339854 BIVM-ERCC5R4GMW8 1640 aa14.6□□□□□ -0.07
MEFV-202ENST00000339854 CUX1P39880 1505 aa14.59□□□□□ -0.07
MEFV-202ENST00000339854 PRXQ9BXM0 1461 aa14.58□□□□□ -0.08
MEFV-202ENST00000339854 MIER1Q8N108 512 aa14.57□□□□□ -0.08
MEFV-202ENST00000339854 ARAP1Q96P48 1450 aa14.55□□□□□ -0.08
MEFV-202ENST00000339854 KIF27Q86VH2 1401 aa14.54□□□□□ -0.08
MEFV-202ENST00000339854 ERICH3Q5RHP9 1530 aa14.53□□□□□ -0.08
MEFV-202ENST00000339854 ITGAEP38570 1179 aa14.53□□□□□ -0.08
MEFV-202ENST00000339854 PELP1Q8IZL8 1130 aaKnown RBP14.52□□□□□ -0.08
MEFV-202ENST00000339854 CFTRP13569 1480 aa14.5□□□□□ -0.09
MEFV-202ENST00000339854 DHX57Q6P158 1386 aaKnown RBP14.45□□□□□ -0.1
MEFV-202ENST00000339854 CUX2O14529 1486 aa14.44□□□□□ -0.1
MEFV-202ENST00000339854 ARHGAP35Q9NRY4 1499 aa14.43□□□□□ -0.1
MEFV-202ENST00000339854 IGF1RP08069 1367 aa14.4□□□□□ -0.1
MEFV-202ENST00000339854 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
MEFV-202ENST00000339854 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
MEFV-202ENST00000339854 ATP1B4Q9UN42 357 aaPredicted RBP14.39□□□□□ -0.11
MEFV-202ENST00000339854 CCNB3Q8WWL7 1395 aa14.38□□□□□ -0.11
MEFV-202ENST00000339854 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
MEFV-202ENST00000339854 RRBP1Q9P2E9 1410 aaKnown RBP14.37□□□□□ -0.11
MEFV-202ENST00000339854 CLSPNQ9HAW4 1339 aa14.36□□□□□ -0.11
MEFV-202ENST00000339854 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
MEFV-202ENST00000339854 FGD5Q6ZNL6 1462 aa14.34□□□□□ -0.11
MEFV-202ENST00000339854 FAM50AQ14320 339 aaKnown RBP14.31□□□□□ -0.12
MEFV-202ENST00000339854 RAB3GAP2Q9H2M9 1393 aa14.28□□□□□ -0.12
MEFV-202ENST00000339854 TIAM1Q13009 1591 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms