Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SYCE2Q6PIF2 NPIPB6-202ENST00000533640 1329 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SYCE2Q6PIF2 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
SYCE2Q6PIF2 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SYCE2Q6PIF2 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SYCE2Q6PIF2 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC9.54□□□□□ -0.88
SYCE2Q6PIF2 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 CNEP1R1-206ENST00000565556 1707 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 ABI1-201ENST00000346832 3289 ntTSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 POLR3G-204ENST00000504930 3251 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 WEE2-AS1-206ENST00000478332 2259 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 AC124017.1-202ENST00000506950 1616 ntTSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 ZSCAN26-202ENST00000421553 2835 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 ZNF610-209ENST00000616431 1772 ntAPPRIS P3 TSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 ZNF155-201ENST00000270014 2596 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 CTCFL-222ENST00000609232 3668 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 EXD2-203ENST00000409018 3252 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 DYRK4-211ENST00000540757 3272 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 IFIT3-202ENST00000371818 2496 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 OR52E4-201ENST00000316987 1027 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 SNORD3G-201ENST00000362796 215 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 RAB18-202ENST00000375802 617 ntTSL 5 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 RIMKLBP1-201ENST00000408914 1164 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 SET-205ENST00000409104 962 ntTSL 5 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 LLPHP2-201ENST00000436405 396 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 ARAFP3-201ENST00000454154 490 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 GGTA1P-204ENST00000488429 1104 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 CXorf56-203ENST00000536133 1089 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 AC084357.3-202ENST00000543539 679 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 MRPL45P2-203ENST00000573318 473 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 RN7SL118P-201ENST00000580570 302 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 RPL17-212ENST00000581373 584 ntTSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 AC018737.1-201ENST00000603900 204 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 FO704657.1-201ENST00000607013 400 ntTSL 3 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 LINC00266-4P-202ENST00000611754 723 ntTSL 5 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 AC215522.1-201ENST00000615488 446 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 DNALI1-201ENST00000296218 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 PRAMEF30P-201ENST00000438176 1417 ntBASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 CHODL-202ENST00000338326 1974 ntTSL 5 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 OGDH-207ENST00000449767 3479 ntAPPRIS ALT1 TSL 2 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 RRP12-201ENST00000315563 4038 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 RBMS3-203ENST00000383767 1864 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 ADAM9-209ENST00000487273 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 SLC12A5-205ENST00000454036 3593 ntTSL 5 BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 KIF5A-202ENST00000455537 5824 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 FCRLA-205ENST00000350710 1639 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SYCE2Q6PIF2 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
SYCE2Q6PIF2 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
SYCE2Q6PIF2 ECE2-204ENST00000402825 3445 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 VSIG4-201ENST00000374737 1834 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 SPECC1-201ENST00000261503 3948 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 RNA5SP250-201ENST00000362534 119 ntBASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 TRBV7-5-201ENST00000390382 345 ntBASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 WDR47-205ENST00000400794 4134 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 PAICSP3-201ENST00000428007 1168 ntBASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 C2orf74-203ENST00000432605 887 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 KCNAB1-AS1-201ENST00000467794 456 ntTSL 2 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 RN7SL659P-201ENST00000483093 299 ntBASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 BX293995.1-201ENST00000502880 755 ntBASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 IGLVI-56-201ENST00000521342 342 ntBASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 BRIX1P1-201ENST00000521785 908 ntBASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 AP006587.2-201ENST00000530696 493 ntBASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 OR7E159P-201ENST00000553761 298 ntBASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 ZEB2P1-202ENST00000572816 902 ntTSL 5 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 PDLIM1P2-201ENST00000582923 607 ntBASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 CCDC90B-214ENST00000529689 4014 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 HTR4-202ENST00000362016 2979 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 MX1-203ENST00000398600 3470 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 SPO11-202ENST00000371260 1608 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
SYCE2Q6PIF2 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYCE2Q6PIF2 SAMD12-201ENST00000314727 2172 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms