RNA–Protein interactions for RNA: ENST00000341403.9

UBXN8-202, Transcript of UBX domain protein 8, humanhuman

TSL 3 BASIC

Gene UBXN8, Length 1,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-202ENST00000341403 AEBP2Q6ZN18 517 aaPredicted RBP20.5■□□□□ 0.87
UBXN8-202ENST00000341403 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
UBXN8-202ENST00000341403 NISCHQ9Y2I1 1504 aa18.51■□□□□ 0.55
UBXN8-202ENST00000341403 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
UBXN8-202ENST00000341403 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
UBXN8-202ENST00000341403 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
UBXN8-202ENST00000341403 FOXD1Q16676 465 aa16.09■□□□□ 0.17
UBXN8-202ENST00000341403 HRCP23327 699 aa15.9■□□□□ 0.14
UBXN8-202ENST00000341403 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
UBXN8-202ENST00000341403 ZCCHC6Q5VYS8 1495 aaKnown RBP15.81■□□□□ 0.12
UBXN8-202ENST00000341403 PELP1Q8IZL8 1130 aaKnown RBP15.76■□□□□ 0.11
UBXN8-202ENST00000341403 DCAF1Q9Y4B6 1507 aa15.7■□□□□ 0.1
UBXN8-202ENST00000341403 ADRA2BP18089 450 aa15.67■□□□□ 0.1
UBXN8-202ENST00000341403 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
UBXN8-202ENST00000341403 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
UBXN8-202ENST00000341403 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
UBXN8-202ENST00000341403 SHROOM4Q9ULL8 1493 aa15.41■□□□□ 0.06
UBXN8-202ENST00000341403 SUPT5HO00267 1087 aaKnown RBP15.4■□□□□ 0.06
UBXN8-202ENST00000341403 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
UBXN8-202ENST00000341403 MYT1Q01538 1121 aa15.37■□□□□ 0.05
UBXN8-202ENST00000341403 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
UBXN8-202ENST00000341403 TRIM26Q12899 539 aaPredicted RBP15.24■□□□□ 0.03
UBXN8-202ENST00000341403 PIAS4Q8N2W9 510 aaPredicted RBP15.24■□□□□ 0.03
UBXN8-202ENST00000341403 MSH5O43196 834 aa15.12■□□□□ 0.01
UBXN8-202ENST00000341403 ABCC9O60706 1549 aa15.04■□□□□ -0
UBXN8-202ENST00000341403 PPARGC1BQ86YN6 1023 aaKnown RBP14.93□□□□□ -0.02
UBXN8-202ENST00000341403 RB1CC1Q8TDY2 1594 aa14.82□□□□□ -0.04
UBXN8-202ENST00000341403 CENPBP07199 599 aaPredicted RBP14.71□□□□□ -0.05
UBXN8-202ENST00000341403 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
UBXN8-202ENST00000341403 LOC105371045A0A1W2PR82 267 aa14.68□□□□□ -0.06
UBXN8-202ENST00000341403 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
UBXN8-202ENST00000341403 ACIN1Q9UKV3 1341 aaKnown RBP14.64□□□□□ -0.07
UBXN8-202ENST00000341403 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
UBXN8-202ENST00000341403 PPP4R3CPQ6ZMV5 832 aa14.58□□□□□ -0.08
UBXN8-202ENST00000341403 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.08
UBXN8-202ENST00000341403 CLSPNQ9HAW4 1339 aa14.55□□□□□ -0.08
UBXN8-202ENST00000341403 TTBK1Q5TCY1 1321 aaPredicted RBP14.5□□□□□ -0.09
UBXN8-202ENST00000341403 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
UBXN8-202ENST00000341403 KCNA4P22459 653 aa14.49□□□□□ -0.09
UBXN8-202ENST00000341403 NACADO15069 1562 aa14.47□□□□□ -0.09
UBXN8-202ENST00000341403 EEA1Q15075 1411 aa14.46□□□□□ -0.09
UBXN8-202ENST00000341403 BAZ1AQ9NRL2 1556 aaPredicted RBP14.42□□□□□ -0.1
UBXN8-202ENST00000341403 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
UBXN8-202ENST00000341403 SCRIBQ14160 1630 aa14.38□□□□□ -0.11
UBXN8-202ENST00000341403 DIEXFQ68CQ4 756 aaKnown RBP14.38□□□□□ -0.11
UBXN8-202ENST00000341403 CCER1Q8TC90 406 aaPredicted RBP14.35□□□□□ -0.11
UBXN8-202ENST00000341403 NEUROD1Q13562 356 aa14.33□□□□□ -0.12
UBXN8-202ENST00000341403 GTF3C3Q9Y5Q9 886 aa14.3□□□□□ -0.12
UBXN8-202ENST00000341403 TNIKQ9UKE5 1360 aa14.28□□□□□ -0.12
UBXN8-202ENST00000341403 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
UBXN8-202ENST00000341403 ZNF316A6NFI3 1004 aaPredicted RBP14.24□□□□□ -0.13
UBXN8-202ENST00000341403 TOP2AP11388 1531 aaKnown RBP14.21□□□□□ -0.13
UBXN8-202ENST00000341403 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
UBXN8-202ENST00000341403 CEP162Q5TB80 1403 aa14.18□□□□□ -0.14
UBXN8-202ENST00000341403 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
UBXN8-202ENST00000341403 WIZO95785 1651 aa14.14□□□□□ -0.15
UBXN8-202ENST00000341403 GOLGA3Q08378 1498 aa14.13□□□□□ -0.15
UBXN8-202ENST00000341403 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
UBXN8-202ENST00000341403 KIF21BO75037 1637 aa14.12□□□□□ -0.15
UBXN8-202ENST00000341403 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
UBXN8-202ENST00000341403 BAZ1BQ9UIG0 1483 aaKnown RBP14.09□□□□□ -0.15
UBXN8-202ENST00000341403 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.16
UBXN8-202ENST00000341403 CECR2Q9BXF3 1484 aa14.07□□□□□ -0.16
UBXN8-202ENST00000341403 NPM3O75607 178 aaKnown RBP14.05□□□□□ -0.16
UBXN8-202ENST00000341403 CEP164Q9UPV0 1460 aa14.05□□□□□ -0.16
UBXN8-202ENST00000341403 SMARCA2P51531 1590 aa14.02□□□□□ -0.16
UBXN8-202ENST00000341403 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
UBXN8-202ENST00000341403 VPS8Q8N3P4 1428 aa13.96□□□□□ -0.18
UBXN8-202ENST00000341403 CCDC88BA6NC98 1476 aa13.95□□□□□ -0.18
UBXN8-202ENST00000341403 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
UBXN8-202ENST00000341403 PEG3Q9GZU2 1588 aa13.95□□□□□ -0.18
UBXN8-202ENST00000341403 CUX2O14529 1486 aa13.87□□□□□ -0.19
UBXN8-202ENST00000341403 DMRT2Q9Y5R5 561 aa13.87□□□□□ -0.19
UBXN8-202ENST00000341403 ABCC8Q09428 1581 aa13.87□□□□□ -0.19
UBXN8-202ENST00000341403 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
UBXN8-202ENST00000341403 CLIP1P30622 1438 aa13.84□□□□□ -0.19
UBXN8-202ENST00000341403 MIER1Q8N108 512 aa13.83□□□□□ -0.2
UBXN8-202ENST00000341403 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.2
UBXN8-202ENST00000341403 SOGA1O94964 1423 aa13.82□□□□□ -0.2
UBXN8-202ENST00000341403 APLP2Q06481 763 aa13.81□□□□□ -0.2
UBXN8-202ENST00000341403 ANP32EQ9BTT0 268 aa13.81□□□□□ -0.2
UBXN8-202ENST00000341403 RNF216Q9NWF9 866 aaPredicted RBP13.78□□□□□ -0.2
UBXN8-202ENST00000341403 UBTFP17480 764 aaKnown RBP13.77□□□□□ -0.21
UBXN8-202ENST00000341403 SUPT16HQ9Y5B9 1047 aaKnown RBP13.76□□□□□ -0.21
UBXN8-202ENST00000341403 RRBP1Q9P2E9 1410 aaKnown RBP13.75□□□□□ -0.21
UBXN8-202ENST00000341403 MYT1LQ9UL68 1186 aa13.74□□□□□ -0.21
UBXN8-202ENST00000341403 DHX57Q6P158 1386 aaKnown RBP13.72□□□□□ -0.21
UBXN8-202ENST00000341403 MAP3K1Q13233 1512 aa13.72□□□□□ -0.21
UBXN8-202ENST00000341403 EHMT2Q96KQ7 1210 aa13.71□□□□□ -0.21
UBXN8-202ENST00000341403 YTHDC1Q96MU7 727 aaKnown RBP13.71□□□□□ -0.21
UBXN8-202ENST00000341403 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
UBXN8-202ENST00000341403 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
UBXN8-202ENST00000341403 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
UBXN8-202ENST00000341403 SYNJ1O43426 1573 aa13.68□□□□□ -0.22
UBXN8-202ENST00000341403 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
UBXN8-202ENST00000341403 UNC13AQ9UPW8 1703 aa13.66□□□□□ -0.22
UBXN8-202ENST00000341403 TSHZ2Q9NRE2 1034 aa13.64□□□□□ -0.23
UBXN8-202ENST00000341403 RUSC2Q8N2Y8 1516 aa13.64□□□□□ -0.23
UBXN8-202ENST00000341403 PRXQ9BXM0 1461 aa13.61□□□□□ -0.23
UBXN8-202ENST00000341403 CCER2I3L3R5 266 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms