Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC31.36■■■□□ 2.61
CDC42BPBQ9Y5S2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC31.36■■■□□ 2.61
CDC42BPBQ9Y5S2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CDC42BPBQ9Y5S2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC31.35■■■□□ 2.61
CDC42BPBQ9Y5S2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CDC42BPBQ9Y5S2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.34■■■□□ 2.61
CDC42BPBQ9Y5S2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CDC42BPBQ9Y5S2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CDC42BPBQ9Y5S2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDC42BPBQ9Y5S2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC31.34■■■□□ 2.61
CDC42BPBQ9Y5S2 HES2-206ENST00000489730 730 ntTSL 2 BASIC31.34■■■□□ 2.61
CDC42BPBQ9Y5S2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC31.34■■■□□ 2.61
CDC42BPBQ9Y5S2 Six3os1_6.1-201ENST00000620790 196 ntBASIC31.34■■■□□ 2.61
CDC42BPBQ9Y5S2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC31.34■■■□□ 2.61
CDC42BPBQ9Y5S2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
CDC42BPBQ9Y5S2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC31.33■■■□□ 2.61
CDC42BPBQ9Y5S2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC31.33■■■□□ 2.61
CDC42BPBQ9Y5S2 AC097493.4-201ENST00000641197 219 ntBASIC31.33■■■□□ 2.61
CDC42BPBQ9Y5S2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC31.33■■■□□ 2.61
CDC42BPBQ9Y5S2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CDC42BPBQ9Y5S2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CDC42BPBQ9Y5S2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CDC42BPBQ9Y5S2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
CDC42BPBQ9Y5S2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC31.33■■■□□ 2.61
CDC42BPBQ9Y5S2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC31.32■■■□□ 2.61
CDC42BPBQ9Y5S2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.61
CDC42BPBQ9Y5S2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
CDC42BPBQ9Y5S2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.61
CDC42BPBQ9Y5S2 AC006557.6-201ENST00000623071 864 ntBASIC31.32■■■□□ 2.61
CDC42BPBQ9Y5S2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CDC42BPBQ9Y5S2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDC42BPBQ9Y5S2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC31.32■■■□□ 2.6
CDC42BPBQ9Y5S2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC31.32■■■□□ 2.6
CDC42BPBQ9Y5S2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDC42BPBQ9Y5S2 AL135905.2-201ENST00000584934 1404 ntBASIC31.32■■■□□ 2.6
CDC42BPBQ9Y5S2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC31.32■■■□□ 2.6
CDC42BPBQ9Y5S2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CDC42BPBQ9Y5S2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDC42BPBQ9Y5S2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDC42BPBQ9Y5S2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDC42BPBQ9Y5S2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 KRT17P2-201ENST00000300992 1314 ntBASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDC42BPBQ9Y5S2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC31.3■■■□□ 2.6
CDC42BPBQ9Y5S2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC31.3■■■□□ 2.6
CDC42BPBQ9Y5S2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC31.3■■■□□ 2.6
CDC42BPBQ9Y5S2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC31.3■■■□□ 2.6
CDC42BPBQ9Y5S2 AC133561.5-201ENST00000635547 218 ntBASIC31.3■■■□□ 2.6
CDC42BPBQ9Y5S2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPBQ9Y5S2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPBQ9Y5S2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC31.3■■■□□ 2.6
CDC42BPBQ9Y5S2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC31.3■■■□□ 2.6
CDC42BPBQ9Y5S2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPBQ9Y5S2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPBQ9Y5S2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPBQ9Y5S2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms