Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP4S1Q9Y587 TNXA-203ENST00000507684 2038 ntBASIC19.36■□□□□ 0.69
AP4S1Q9Y587 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
AP4S1Q9Y587 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.36■□□□□ 0.69
AP4S1Q9Y587 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
AP4S1Q9Y587 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
AP4S1Q9Y587 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4S1Q9Y587 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.36■□□□□ 0.69
AP4S1Q9Y587 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4S1Q9Y587 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP4S1Q9Y587 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
AP4S1Q9Y587 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 MIR4787-201ENST00000607364 84 ntBASIC19.35■□□□□ 0.69
AP4S1Q9Y587 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 AC092720.2-201ENST00000602388 1665 ntBASIC19.35■□□□□ 0.69
AP4S1Q9Y587 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.35■□□□□ 0.69
AP4S1Q9Y587 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 AC011484.1-201ENST00000377652 1995 ntBASIC19.34■□□□□ 0.69
AP4S1Q9Y587 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 AC004408.2-201ENST00000623613 2777 ntBASIC19.34■□□□□ 0.69
AP4S1Q9Y587 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
AP4S1Q9Y587 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
AP4S1Q9Y587 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.33■□□□□ 0.69
AP4S1Q9Y587 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
AP4S1Q9Y587 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
AP4S1Q9Y587 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP4S1Q9Y587 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP4S1Q9Y587 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP4S1Q9Y587 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP4S1Q9Y587 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
AP4S1Q9Y587 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
AP4S1Q9Y587 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.33■□□□□ 0.68
AP4S1Q9Y587 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.33■□□□□ 0.68
AP4S1Q9Y587 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
AP4S1Q9Y587 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
AP4S1Q9Y587 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP4S1Q9Y587 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP4S1Q9Y587 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP4S1Q9Y587 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.33■□□□□ 0.68
AP4S1Q9Y587 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 AL033527.3-201ENST00000566366 1196 ntBASIC19.32■□□□□ 0.68
AP4S1Q9Y587 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.32■□□□□ 0.68
AP4S1Q9Y587 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4S1Q9Y587 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.31■□□□□ 0.68
AP4S1Q9Y587 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4S1Q9Y587 BX005040.4-201ENST00000637145 1518 ntBASIC19.31■□□□□ 0.68
AP4S1Q9Y587 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4S1Q9Y587 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4S1Q9Y587 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP4S1Q9Y587 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms