Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHTOPQ9Y3Y2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHTOPQ9Y3Y2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.69□□□□□ -0.06
CHTOPQ9Y3Y2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.69□□□□□ -0.06
CHTOPQ9Y3Y2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.69□□□□□ -0.06
CHTOPQ9Y3Y2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.69□□□□□ -0.06
CHTOPQ9Y3Y2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHTOPQ9Y3Y2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 SNX5-217ENST00000606557 1087 ntBASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHTOPQ9Y3Y2 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 AC005703.6-201ENST00000623265 1329 ntBASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 KRT18P24-201ENST00000344739 1156 ntBASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 MIR639-201ENST00000384974 98 ntBASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHTOPQ9Y3Y2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHTOPQ9Y3Y2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHTOPQ9Y3Y2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHTOPQ9Y3Y2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CHTOPQ9Y3Y2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHTOPQ9Y3Y2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CHTOPQ9Y3Y2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHTOPQ9Y3Y2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHTOPQ9Y3Y2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHTOPQ9Y3Y2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CHTOPQ9Y3Y2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHTOPQ9Y3Y2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms