Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 AC112907.3-201ENST00000577781 2400 ntBASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 AC008175.2-201ENST00000612840 297 ntBASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MRPS28Q9Y2Q9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 AC012414.1-201ENST00000556676 535 ntBASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 AF213884.3-201ENST00000563833 479 ntBASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 AL355001.2-201ENST00000620617 1191 ntBASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 AC099778.1-201ENST00000568593 1911 ntBASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MRPS28Q9Y2Q9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 MIR939-201ENST00000401314 82 ntBASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 POU5F1P4-201ENST00000413175 1085 ntBASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 AC091305.1-201ENST00000479476 895 ntBASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 AC092720.2-201ENST00000602388 1665 ntBASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPS28Q9Y2Q9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MRPS28Q9Y2Q9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms