Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 TSPY9P-201ENST00000440215 945 ntBASIC19.81■□□□□ 0.76
NDE1Q9NXR1 TSPY11P-201ENST00000442607 1045 ntBASIC19.81■□□□□ 0.76
NDE1Q9NXR1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 AP000974.1-201ENST00000623909 2387 ntBASIC19.81■□□□□ 0.76
NDE1Q9NXR1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 TNXA-203ENST00000507684 2038 ntBASIC19.81■□□□□ 0.76
NDE1Q9NXR1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDE1Q9NXR1 AC138932.1-201ENST00000534164 6830 ntBASIC19.8■□□□□ 0.76
NDE1Q9NXR1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDE1Q9NXR1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDE1Q9NXR1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDE1Q9NXR1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NDE1Q9NXR1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
NDE1Q9NXR1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
NDE1Q9NXR1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NDE1Q9NXR1 AP005435.1-201ENST00000529293 1178 ntBASIC19.8■□□□□ 0.76
NDE1Q9NXR1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDE1Q9NXR1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDE1Q9NXR1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 AC010525.1-201ENST00000585559 441 ntBASIC19.79■□□□□ 0.76
NDE1Q9NXR1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDE1Q9NXR1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 AC004408.2-201ENST00000623613 2777 ntBASIC19.78■□□□□ 0.76
NDE1Q9NXR1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDE1Q9NXR1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDE1Q9NXR1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NDE1Q9NXR1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NDE1Q9NXR1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDE1Q9NXR1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NDE1Q9NXR1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NDE1Q9NXR1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.77■□□□□ 0.76
NDE1Q9NXR1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NDE1Q9NXR1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NDE1Q9NXR1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
NDE1Q9NXR1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NDE1Q9NXR1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
NDE1Q9NXR1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NDE1Q9NXR1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NDE1Q9NXR1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms