Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 MIR6821-201ENST00000617625 74 ntBASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 AC019069.1-201ENST00000610008 1333 ntBASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 UBE2DNL-204ENST00000602536 740 ntBASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 AC087623.3-201ENST00000607047 1098 ntBASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 AC243732.1-201ENST00000612648 864 ntBASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC3Q9NUD5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.24■□□□□ 0.67
ZCCHC3Q9NUD5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 AC020907.5-201ENST00000624372 1936 ntBASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC3Q9NUD5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 AC091799.1-201ENST00000422823 811 ntBASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 MYCNOS-205ENST00000641950 531 ntBASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.22■□□□□ 0.67
ZCCHC3Q9NUD5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms