Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB16Q9NRJ7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB16Q9NRJ7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 RASA4CP-201ENST00000424092 1398 ntBASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB16Q9NRJ7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 AC053503.5-201ENST00000601508 636 ntBASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHB16Q9NRJ7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 GABARAPL3-202ENST00000624044 1851 ntBASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHB16Q9NRJ7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHB16Q9NRJ7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
PCDHB16Q9NRJ7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 AP004607.4-201ENST00000530158 1459 ntBASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB16Q9NRJ7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms