Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 AC008175.2-201ENST00000612840 297 ntBASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 AC019069.1-201ENST00000610008 1333 ntBASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC52A3Q9NQ40 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 KRT16P2-201ENST00000414673 1423 ntBASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 AF213884.3-201ENST00000563833 479 ntBASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 AC138907.5-202ENST00000569484 235 ntBASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 AL355001.2-201ENST00000620617 1191 ntBASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.44■□□□□ 0.7
SLC52A3Q9NQ40 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC52A3Q9NQ40 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 AL158211.5-201ENST00000623583 2518 ntBASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 AC091305.1-201ENST00000479476 895 ntBASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 AC116562.4-201ENST00000641316 2276 ntBASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC52A3Q9NQ40 KRT87P-202ENST00000534226 1464 ntBASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 AL354811.1-201ENST00000610286 706 ntBASIC19.41■□□□□ 0.7
SLC52A3Q9NQ40 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms