Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRTM1Q9HBL6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 AL162377.1-201ENST00000618844 1793 ntBASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 AL121603.2-201ENST00000557373 2117 ntBASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LRTM1Q9HBL6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 YBX1P1-201ENST00000445822 960 ntBASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 TERF1P2-201ENST00000583350 1212 ntBASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.69■□□□□ 0.74
LRTM1Q9HBL6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 AC092720.2-201ENST00000602388 1665 ntBASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 AC116050.2-201ENST00000612102 1779 ntBASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.68■□□□□ 0.74
LRTM1Q9HBL6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRTM1Q9HBL6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 KRT18P20-201ENST00000548986 1279 ntBASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 CCDC92B-201ENST00000575506 885 ntBASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms