Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX47Q9H0S4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX47Q9H0S4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
DDX47Q9H0S4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX47Q9H0S4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX47Q9H0S4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX47Q9H0S4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
DDX47Q9H0S4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DDX47Q9H0S4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
DDX47Q9H0S4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.33■■□□□ 1.01
DDX47Q9H0S4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.33■■□□□ 1.01
DDX47Q9H0S4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX47Q9H0S4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.33■■□□□ 1
DDX47Q9H0S4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DDX47Q9H0S4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DDX47Q9H0S4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.32■■□□□ 1
DDX47Q9H0S4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX47Q9H0S4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX47Q9H0S4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.32■■□□□ 1
DDX47Q9H0S4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX47Q9H0S4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX47Q9H0S4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.32■■□□□ 1
DDX47Q9H0S4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.32■■□□□ 1
DDX47Q9H0S4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
DDX47Q9H0S4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX47Q9H0S4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX47Q9H0S4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX47Q9H0S4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX47Q9H0S4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX47Q9H0S4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.32■■□□□ 1
DDX47Q9H0S4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
DDX47Q9H0S4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.31■■□□□ 1
DDX47Q9H0S4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
DDX47Q9H0S4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.31■■□□□ 1
DDX47Q9H0S4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.31■■□□□ 1
DDX47Q9H0S4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.31■■□□□ 1
DDX47Q9H0S4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.31■■□□□ 1
DDX47Q9H0S4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.31■■□□□ 1
DDX47Q9H0S4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.31■■□□□ 1
DDX47Q9H0S4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX47Q9H0S4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.3■■□□□ 1
DDX47Q9H0S4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.3■■□□□ 1
DDX47Q9H0S4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.3■■□□□ 1
DDX47Q9H0S4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX47Q9H0S4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
DDX47Q9H0S4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
DDX47Q9H0S4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.3■■□□□ 1
DDX47Q9H0S4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.3■■□□□ 1
DDX47Q9H0S4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DDX47Q9H0S4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX47Q9H0S4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
DDX47Q9H0S4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.3■■□□□ 1
DDX47Q9H0S4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.3■■□□□ 1
DDX47Q9H0S4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.3■■□□□ 1
DDX47Q9H0S4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.3■■□□□ 1
DDX47Q9H0S4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX47Q9H0S4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
DDX47Q9H0S4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.3■■□□□ 1
DDX47Q9H0S4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX47Q9H0S4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX47Q9H0S4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.29■■□□□ 1
DDX47Q9H0S4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms