Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD4Q9H0A8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 AC008764.7-201ENST00000593779 1081 ntBASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD4Q9H0A8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 AL512408.1-201ENST00000569378 2000 ntBASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 TSPY26P-201ENST00000476365 1326 ntBASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 AC053503.5-201ENST00000601508 636 ntBASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.06■□□□□ 0.48
COMMD4Q9H0A8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 AL162377.1-201ENST00000618844 1793 ntBASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 AC099791.1-201ENST00000416440 715 ntBASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 AC027682.1-201ENST00000562846 899 ntBASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD4Q9H0A8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 AC008406.3-201ENST00000620001 1374 ntBASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 AFG3L1P-217ENST00000557444 2447 ntBASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 EEF1DP3-203ENST00000566025 782 ntBASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD4Q9H0A8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms