Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
S1PR3Q99500 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
S1PR3Q99500 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.89■□□□□ 0.29
S1PR3Q99500 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR3Q99500 SLC25A24-204ENST00000569674 2357 ntBASIC16.89■□□□□ 0.29
S1PR3Q99500 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
S1PR3Q99500 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR3Q99500 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR3Q99500 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR3Q99500 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR3Q99500 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.89■□□□□ 0.29
S1PR3Q99500 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
S1PR3Q99500 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.88■□□□□ 0.29
S1PR3Q99500 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
S1PR3Q99500 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
S1PR3Q99500 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
S1PR3Q99500 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
S1PR3Q99500 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.88■□□□□ 0.29
S1PR3Q99500 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.88■□□□□ 0.29
S1PR3Q99500 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
S1PR3Q99500 AP001160.3-201ENST00000601484 763 ntBASIC16.88■□□□□ 0.29
S1PR3Q99500 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
S1PR3Q99500 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.88■□□□□ 0.29
S1PR3Q99500 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.88■□□□□ 0.29
S1PR3Q99500 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR3Q99500 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.88■□□□□ 0.29
S1PR3Q99500 AC011484.1-201ENST00000377652 1995 ntBASIC16.88■□□□□ 0.29
S1PR3Q99500 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.87■□□□□ 0.29
S1PR3Q99500 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.87■□□□□ 0.29
S1PR3Q99500 KRT18P20-201ENST00000548986 1279 ntBASIC16.87■□□□□ 0.29
S1PR3Q99500 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.87■□□□□ 0.29
S1PR3Q99500 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.87■□□□□ 0.29
S1PR3Q99500 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
S1PR3Q99500 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
S1PR3Q99500 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
S1PR3Q99500 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
S1PR3Q99500 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
S1PR3Q99500 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
S1PR3Q99500 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
S1PR3Q99500 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.86■□□□□ 0.29
S1PR3Q99500 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
S1PR3Q99500 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.86■□□□□ 0.29
S1PR3Q99500 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.86■□□□□ 0.29
S1PR3Q99500 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
S1PR3Q99500 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.86■□□□□ 0.29
S1PR3Q99500 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.86■□□□□ 0.29
S1PR3Q99500 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.86■□□□□ 0.29
S1PR3Q99500 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
S1PR3Q99500 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
S1PR3Q99500 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
S1PR3Q99500 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
S1PR3Q99500 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
S1PR3Q99500 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
S1PR3Q99500 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
S1PR3Q99500 GABARAPL3-202ENST00000624044 1851 ntBASIC16.86■□□□□ 0.29
S1PR3Q99500 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
S1PR3Q99500 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
S1PR3Q99500 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.85■□□□□ 0.29
S1PR3Q99500 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.85■□□□□ 0.29
S1PR3Q99500 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
S1PR3Q99500 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms