Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK5RAP1Q96SZ6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 AC121338.2-201ENST00000622535 1744 ntBASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDK5RAP1Q96SZ6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CDK5RAP1Q96SZ6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDK5RAP1Q96SZ6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.33■■□□□ 1
CDK5RAP1Q96SZ6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 AL356652.1-201ENST00000615962 565 ntBASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK5RAP1Q96SZ6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 AC027702.1-201ENST00000563810 1770 ntBASIC21.31■■□□□ 1
CDK5RAP1Q96SZ6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 PKD1P6-201ENST00000343738 4769 ntBASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
CDK5RAP1Q96SZ6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 RNA5SP413-201ENST00000516373 109 ntBASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDK5RAP1Q96SZ6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms