Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40CQ96S21 AIRN-201ENST00000601203 4374 ntBASIC16.59■□□□□ 0.25
RAB40CQ96S21 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB40CQ96S21 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40CQ96S21 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40CQ96S21 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40CQ96S21 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB40CQ96S21 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.59■□□□□ 0.25
RAB40CQ96S21 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40CQ96S21 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.59■□□□□ 0.25
RAB40CQ96S21 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB40CQ96S21 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40CQ96S21 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40CQ96S21 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.59■□□□□ 0.25
RAB40CQ96S21 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB40CQ96S21 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB40CQ96S21 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB40CQ96S21 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40CQ96S21 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40CQ96S21 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40CQ96S21 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40CQ96S21 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40CQ96S21 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40CQ96S21 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40CQ96S21 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40CQ96S21 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40CQ96S21 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 SMUG1P1-201ENST00000590640 811 ntBASIC16.58■□□□□ 0.24
RAB40CQ96S21 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 AC009237.3-201ENST00000393279 1427 ntBASIC16.58■□□□□ 0.24
RAB40CQ96S21 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40CQ96S21 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40CQ96S21 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RAB40CQ96S21 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40CQ96S21 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40CQ96S21 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
RAB40CQ96S21 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB40CQ96S21 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 SLC47A1P1-202ENST00000449666 945 ntBASIC16.57■□□□□ 0.24
RAB40CQ96S21 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.57■□□□□ 0.24
RAB40CQ96S21 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB40CQ96S21 DUX4L19-201ENST00000557448 1267 ntBASIC16.57■□□□□ 0.24
RAB40CQ96S21 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB40CQ96S21 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB40CQ96S21 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB40CQ96S21 AC136469.2-201ENST00000623944 1028 ntBASIC16.57■□□□□ 0.24
RAB40CQ96S21 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RAB40CQ96S21 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RAB40CQ96S21 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 AL020996.1-203ENST00000536896 2307 ntBASIC16.57■□□□□ 0.24
RAB40CQ96S21 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40CQ96S21 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
RAB40CQ96S21 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RAB40CQ96S21 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40CQ96S21 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB40CQ96S21 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40CQ96S21 SYT6-210ENST00000641643 1587 ntBASIC16.56■□□□□ 0.24
RAB40CQ96S21 AC138932.1-201ENST00000534164 6830 ntBASIC16.56■□□□□ 0.24
RAB40CQ96S21 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40CQ96S21 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40CQ96S21 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB40CQ96S21 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB40CQ96S21 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
RAB40CQ96S21 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB40CQ96S21 AC131212.1-201ENST00000613771 668 ntBASIC16.56■□□□□ 0.24
RAB40CQ96S21 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.56■□□□□ 0.24
RAB40CQ96S21 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB40CQ96S21 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB40CQ96S21 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40CQ96S21 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40CQ96S21 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB40CQ96S21 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40CQ96S21 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms